Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC58Q4VC31 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC58Q4VC31 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
CCDC58Q4VC31 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CCDC58Q4VC31 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC58Q4VC31 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.43■□□□□ 0.22
CCDC58Q4VC31 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC58Q4VC31 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC58Q4VC31 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC58Q4VC31 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC58Q4VC31 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC58Q4VC31 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC58Q4VC31 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC58Q4VC31 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 Z85996.1-201ENST00000494644 937 ntBASIC16.42■□□□□ 0.22
CCDC58Q4VC31 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 IKBKGP1-201ENST00000612193 1073 ntBASIC16.42■□□□□ 0.22
CCDC58Q4VC31 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 AC134043.2-201ENST00000624206 2238 ntBASIC16.42■□□□□ 0.22
CCDC58Q4VC31 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC58Q4VC31 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.41■□□□□ 0.22
CCDC58Q4VC31 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 LINC00896-202ENST00000609602 2128 ntBASIC16.41■□□□□ 0.22
CCDC58Q4VC31 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 AC008556.1-201ENST00000610908 2040 ntBASIC16.41■□□□□ 0.22
CCDC58Q4VC31 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC58Q4VC31 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC58Q4VC31 AC080080.1-201ENST00000625121 2420 ntBASIC16.4■□□□□ 0.22
CCDC58Q4VC31 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CCDC58Q4VC31 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC58Q4VC31 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CCDC58Q4VC31 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms