Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
LINC01559Q495D7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01559Q495D7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01559Q495D7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
LINC01559Q495D7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
LINC01559Q495D7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01559Q495D7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01559Q495D7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01559Q495D7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01559Q495D7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01559Q495D7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01559Q495D7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
LINC01559Q495D7 FLJ13224-201ENST00000313737 1514 ntBASIC13.74□□□□□ -0.21
LINC01559Q495D7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.74□□□□□ -0.21
LINC01559Q495D7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LINC01559Q495D7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.74□□□□□ -0.21
LINC01559Q495D7 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC13.74□□□□□ -0.21
LINC01559Q495D7 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC13.74□□□□□ -0.21
LINC01559Q495D7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LINC01559Q495D7 TSPY6P-201ENST00000448518 926 ntBASIC13.74□□□□□ -0.21
LINC01559Q495D7 Z85996.1-201ENST00000494644 937 ntBASIC13.74□□□□□ -0.21
LINC01559Q495D7 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC01559Q495D7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.74□□□□□ -0.21
LINC01559Q495D7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LINC01559Q495D7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC01559Q495D7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC01559Q495D7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.74□□□□□ -0.21
LINC01559Q495D7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC13.74□□□□□ -0.21
LINC01559Q495D7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC13.74□□□□□ -0.21
LINC01559Q495D7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
LINC01559Q495D7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01559Q495D7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
LINC01559Q495D7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01559Q495D7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01559Q495D7 KRT8P11-201ENST00000409686 1436 ntBASIC13.73□□□□□ -0.21
LINC01559Q495D7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01559Q495D7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01559Q495D7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01559Q495D7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01559Q495D7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 ACTR6P1-201ENST00000514311 1104 ntBASIC13.73□□□□□ -0.21
LINC01559Q495D7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01559Q495D7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 AC083880.1-201ENST00000608266 535 ntBASIC13.73□□□□□ -0.21
LINC01559Q495D7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01559Q495D7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01559Q495D7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01559Q495D7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01559Q495D7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01559Q495D7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01559Q495D7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01559Q495D7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01559Q495D7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
LINC01559Q495D7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms