Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS1Q01581 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS1Q01581 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS1Q01581 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS1Q01581 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS1Q01581 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS1Q01581 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS1Q01581 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.7■□□□□ 0.42
HMGCS1Q01581 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS1Q01581 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS1Q01581 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS1Q01581 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.7■□□□□ 0.42
HMGCS1Q01581 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.7■□□□□ 0.42
HMGCS1Q01581 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.7■□□□□ 0.42
HMGCS1Q01581 MIR4785-201ENST00000585005 73 ntBASIC17.7■□□□□ 0.42
HMGCS1Q01581 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS1Q01581 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS1Q01581 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.7■□□□□ 0.42
HMGCS1Q01581 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS1Q01581 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS1Q01581 AC138028.4-201ENST00000564984 1845 ntBASIC17.7■□□□□ 0.42
HMGCS1Q01581 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS1Q01581 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS1Q01581 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
HMGCS1Q01581 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.69■□□□□ 0.42
HMGCS1Q01581 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS1Q01581 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS1Q01581 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS1Q01581 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS1Q01581 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS1Q01581 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS1Q01581 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS1Q01581 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS1Q01581 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.69■□□□□ 0.42
HMGCS1Q01581 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS1Q01581 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS1Q01581 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.69■□□□□ 0.42
HMGCS1Q01581 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HMGCS1Q01581 AL353719.1-201ENST00000566847 864 ntBASIC17.69■□□□□ 0.42
HMGCS1Q01581 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS1Q01581 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS1Q01581 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS1Q01581 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HMGCS1Q01581 GMCL1P1-201ENST00000463439 1581 ntBASIC17.69■□□□□ 0.42
HMGCS1Q01581 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS1Q01581 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.69■□□□□ 0.42
HMGCS1Q01581 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS1Q01581 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.69■□□□□ 0.42
HMGCS1Q01581 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.69■□□□□ 0.42
HMGCS1Q01581 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.69■□□□□ 0.42
HMGCS1Q01581 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCS1Q01581 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCS1Q01581 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCS1Q01581 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCS1Q01581 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.68■□□□□ 0.42
HMGCS1Q01581 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.68■□□□□ 0.42
HMGCS1Q01581 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCS1Q01581 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCS1Q01581 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCS1Q01581 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCS1Q01581 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
HMGCS1Q01581 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HMGCS1Q01581 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HMGCS1Q01581 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCS1Q01581 SLC25A1P2-201ENST00000430693 912 ntBASIC17.68■□□□□ 0.42
HMGCS1Q01581 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.68■□□□□ 0.42
HMGCS1Q01581 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCS1Q01581 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCS1Q01581 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
HMGCS1Q01581 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCS1Q01581 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCS1Q01581 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.68■□□□□ 0.42
HMGCS1Q01581 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HMGCS1Q01581 CR769767.2-201ENST00000622735 460 ntBASIC17.68■□□□□ 0.42
HMGCS1Q01581 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCS1Q01581 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCS1Q01581 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCS1Q01581 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCS1Q01581 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCS1Q01581 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCS1Q01581 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCS1Q01581 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCS1Q01581 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCS1Q01581 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCS1Q01581 AL096828.2-201ENST00000567259 1965 ntBASIC17.68■□□□□ 0.42
HMGCS1Q01581 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCS1Q01581 AL163051.1-201ENST00000569214 1512 ntBASIC17.67■□□□□ 0.42
HMGCS1Q01581 SDHAP2-201ENST00000455183 2001 ntBASIC17.67■□□□□ 0.42
HMGCS1Q01581 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.67■□□□□ 0.42
HMGCS1Q01581 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.67■□□□□ 0.42
HMGCS1Q01581 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.67■□□□□ 0.42
HMGCS1Q01581 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCS1Q01581 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HMGCS1Q01581 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HMGCS1Q01581 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCS1Q01581 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HMGCS1Q01581 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.67■□□□□ 0.42
HMGCS1Q01581 PHGDH-209ENST00000641074 1780 ntBASIC17.67■□□□□ 0.42
HMGCS1Q01581 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCS1Q01581 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms