Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AL161938.1-201ENST00000569833 2180 ntBASIC16.17■□□□□ 0.18
NKX6-1P78426 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
NKX6-1P78426 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-1P78426 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-1P78426 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-1P78426 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-1P78426 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-1P78426 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-1P78426 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-1P78426 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.16■□□□□ 0.18
NKX6-1P78426 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-1P78426 RCC2P3-201ENST00000418112 1537 ntBASIC16.16■□□□□ 0.18
NKX6-1P78426 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-1P78426 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-1P78426 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.16■□□□□ 0.18
NKX6-1P78426 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-1P78426 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-1P78426 AC004870.1-201ENST00000315132 882 ntBASIC16.16■□□□□ 0.18
NKX6-1P78426 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-1P78426 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.16■□□□□ 0.18
NKX6-1P78426 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.16■□□□□ 0.18
NKX6-1P78426 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-1P78426 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.16■□□□□ 0.18
NKX6-1P78426 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
NKX6-1P78426 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NKX6-1P78426 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-1P78426 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-1P78426 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-1P78426 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NKX6-1P78426 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.16■□□□□ 0.18
NKX6-1P78426 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-1P78426 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-1P78426 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-1P78426 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-1P78426 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-1P78426 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-1P78426 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-1P78426 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.15■□□□□ 0.18
NKX6-1P78426 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-1P78426 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-1P78426 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
NKX6-1P78426 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-1P78426 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-1P78426 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.15■□□□□ 0.18
NKX6-1P78426 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-1P78426 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NKX6-1P78426 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-1P78426 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-1P78426 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-1P78426 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-1P78426 NEFHP1-201ENST00000412845 2629 ntBASIC16.15■□□□□ 0.18
NKX6-1P78426 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.15■□□□□ 0.18
NKX6-1P78426 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-1P78426 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.15■□□□□ 0.18
NKX6-1P78426 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.15■□□□□ 0.18
NKX6-1P78426 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-1P78426 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
NKX6-1P78426 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.15■□□□□ 0.18
NKX6-1P78426 AC036111.1-201ENST00000533973 1582 ntBASIC16.15■□□□□ 0.18
NKX6-1P78426 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-1P78426 AC111152.3-201ENST00000569699 673 ntBASIC16.15■□□□□ 0.18
NKX6-1P78426 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
NKX6-1P78426 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-1P78426 NPAP1P7-201ENST00000613027 823 ntBASIC16.15■□□□□ 0.18
NKX6-1P78426 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-1P78426 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
NKX6-1P78426 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-1P78426 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-1P78426 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-1P78426 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-1P78426 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.15■□□□□ 0.18
NKX6-1P78426 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-1P78426 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.15■□□□□ 0.18
NKX6-1P78426 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-1P78426 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-1P78426 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.15■□□□□ 0.18
NKX6-1P78426 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NKX6-1P78426 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.14■□□□□ 0.18
NKX6-1P78426 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
NKX6-1P78426 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-1P78426 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-1P78426 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-1P78426 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.14■□□□□ 0.17
NKX6-1P78426 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
NKX6-1P78426 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-1P78426 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-1P78426 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-1P78426 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-1P78426 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.14■□□□□ 0.17
NKX6-1P78426 AL845331.1-201ENST00000424978 1190 ntBASIC16.14■□□□□ 0.17
NKX6-1P78426 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.14■□□□□ 0.17
NKX6-1P78426 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
NKX6-1P78426 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.14■□□□□ 0.17
NKX6-1P78426 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-1P78426 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-1P78426 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-1P78426 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
NKX6-1P78426 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-1P78426 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NKX6-1P78426 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms