Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.32■■□□□ 1
IRX3P78415 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IRX3P78415 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
IRX3P78415 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
IRX3P78415 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.32■■□□□ 1
IRX3P78415 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
IRX3P78415 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.31■■□□□ 1
IRX3P78415 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
IRX3P78415 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.31■■□□□ 1
IRX3P78415 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
IRX3P78415 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IRX3P78415 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.31■■□□□ 1
IRX3P78415 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IRX3P78415 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.31■■□□□ 1
IRX3P78415 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
IRX3P78415 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
IRX3P78415 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IRX3P78415 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IRX3P78415 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IRX3P78415 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
IRX3P78415 AC091607.1-201ENST00000490318 1060 ntBASIC21.31■■□□□ 1
IRX3P78415 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.31■■□□□ 1
IRX3P78415 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
IRX3P78415 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.31■■□□□ 1
IRX3P78415 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IRX3P78415 REXO1L6P-202ENST00000619970 1078 ntBASIC21.31■■□□□ 1
IRX3P78415 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.31■■□□□ 1
IRX3P78415 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.31■■□□□ 1
IRX3P78415 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IRX3P78415 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IRX3P78415 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
IRX3P78415 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.31■■□□□ 1
IRX3P78415 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
IRX3P78415 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
IRX3P78415 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IRX3P78415 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IRX3P78415 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
IRX3P78415 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.3■■□□□ 1
IRX3P78415 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IRX3P78415 KRT8P50-201ENST00000562022 1438 ntBASIC21.3■■□□□ 1
IRX3P78415 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.3■■□□□ 1
IRX3P78415 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.3■■□□□ 1
IRX3P78415 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IRX3P78415 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
IRX3P78415 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IRX3P78415 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
IRX3P78415 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.3■■□□□ 1
IRX3P78415 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.3■■□□□ 1
IRX3P78415 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.3■■□□□ 1
IRX3P78415 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.3■■□□□ 1
IRX3P78415 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.3■■□□□ 1
IRX3P78415 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
IRX3P78415 GPALPP1-207ENST00000611650 899 ntBASIC21.3■■□□□ 1
IRX3P78415 AC120114.3-201ENST00000611923 658 ntBASIC21.3■■□□□ 1
IRX3P78415 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.3■■□□□ 1
IRX3P78415 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.3■■□□□ 1
IRX3P78415 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
IRX3P78415 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.3■■□□□ 1
IRX3P78415 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.3■■□□□ 1
IRX3P78415 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
IRX3P78415 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
IRX3P78415 HLA-A-201ENST00000376802 1334 ntBASIC21.29■■□□□ 1
IRX3P78415 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IRX3P78415 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
IRX3P78415 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
IRX3P78415 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IRX3P78415 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
IRX3P78415 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.29■■□□□ 1
IRX3P78415 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IRX3P78415 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
IRX3P78415 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
IRX3P78415 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.29■■□□□ 1
IRX3P78415 TSPY12P-201ENST00000421279 868 ntBASIC21.29■■□□□ 1
IRX3P78415 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.29■■□□□ 1
IRX3P78415 AC004263.2-201ENST00000617183 678 ntBASIC21.29■■□□□ 1
IRX3P78415 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
IRX3P78415 AL357033.4-201ENST00000617703 1807 ntBASIC21.29■■□□□ 1
IRX3P78415 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.29■■□□□ 1
IRX3P78415 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.29■■□□□ 1
IRX3P78415 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.28■■□□□ 1
IRX3P78415 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
IRX3P78415 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IRX3P78415 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IRX3P78415 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.28■■□□□ 1
IRX3P78415 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IRX3P78415 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IRX3P78415 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IRX3P78415 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
IRX3P78415 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.28■■□□□ 1
IRX3P78415 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.28■■□□□ 1
IRX3P78415 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.28■■□□□ 1
IRX3P78415 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.28■■□□□ 1
IRX3P78415 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.28■■□□□ 1
IRX3P78415 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.28■■□□□ 1
IRX3P78415 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.28■■□□□ 1
IRX3P78415 AC064862.7-201ENST00000604520 867 ntBASIC21.28■■□□□ 1
IRX3P78415 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.28■■□□□ 1
IRX3P78415 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IRX3P78415 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
IRX3P78415 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms