Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TPM4P67936 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TPM4P67936 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TPM4P67936 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TPM4P67936 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.58■□□□□ 0.89
TPM4P67936 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TPM4P67936 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
TPM4P67936 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.58■□□□□ 0.89
TPM4P67936 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
TPM4P67936 AC098934.4-201ENST00000564127 592 ntBASIC20.58■□□□□ 0.89
TPM4P67936 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.58■□□□□ 0.89
TPM4P67936 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TPM4P67936 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.58■□□□□ 0.89
TPM4P67936 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.88
TPM4P67936 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
TPM4P67936 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TPM4P67936 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TPM4P67936 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
TPM4P67936 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.57■□□□□ 0.88
TPM4P67936 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TPM4P67936 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM4P67936 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.57■□□□□ 0.88
TPM4P67936 SIRPAP1-201ENST00000448467 1770 ntBASIC20.57■□□□□ 0.88
TPM4P67936 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.57■□□□□ 0.88
TPM4P67936 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TPM4P67936 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM4P67936 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM4P67936 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.57■□□□□ 0.88
TPM4P67936 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM4P67936 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TPM4P67936 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM4P67936 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM4P67936 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TPM4P67936 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM4P67936 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM4P67936 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.57■□□□□ 0.88
TPM4P67936 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.57■□□□□ 0.88
TPM4P67936 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TPM4P67936 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TPM4P67936 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TPM4P67936 PRORSD1P-202ENST00000563365 2154 ntBASIC20.57■□□□□ 0.88
TPM4P67936 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.57■□□□□ 0.88
TPM4P67936 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM4P67936 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TPM4P67936 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TPM4P67936 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
TPM4P67936 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TPM4P67936 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM4P67936 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM4P67936 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM4P67936 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM4P67936 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TPM4P67936 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM4P67936 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TPM4P67936 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TPM4P67936 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TPM4P67936 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TPM4P67936 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TPM4P67936 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TPM4P67936 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TPM4P67936 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TPM4P67936 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.56■□□□□ 0.88
TPM4P67936 AL445675.2-201ENST00000620291 557 ntBASIC20.56■□□□□ 0.88
TPM4P67936 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.56■□□□□ 0.88
TPM4P67936 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TPM4P67936 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TPM4P67936 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TPM4P67936 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TPM4P67936 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TPM4P67936 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.56■□□□□ 0.88
TPM4P67936 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TPM4P67936 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.56■□□□□ 0.88
TPM4P67936 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TPM4P67936 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TPM4P67936 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TPM4P67936 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TPM4P67936 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TPM4P67936 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.55■□□□□ 0.88
TPM4P67936 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TPM4P67936 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TPM4P67936 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TPM4P67936 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TPM4P67936 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TPM4P67936 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.55■□□□□ 0.88
TPM4P67936 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.55■□□□□ 0.88
TPM4P67936 AC069152.1-201ENST00000438030 544 ntBASIC20.55■□□□□ 0.88
TPM4P67936 KRT16P5-201ENST00000455284 522 ntBASIC20.55■□□□□ 0.88
TPM4P67936 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TPM4P67936 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TPM4P67936 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TPM4P67936 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.55■□□□□ 0.88
TPM4P67936 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TPM4P67936 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.55■□□□□ 0.88
TPM4P67936 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TPM4P67936 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TPM4P67936 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TPM4P67936 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.55■□□□□ 0.88
TPM4P67936 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC20.55■□□□□ 0.88
TPM4P67936 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TPM4P67936 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms