Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
YBX1P67809 KRT18P23-201ENST00000435622 1283 ntBASIC17.9■□□□□ 0.46
YBX1P67809 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.9■□□□□ 0.46
YBX1P67809 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.9■□□□□ 0.46
YBX1P67809 BX664615.1-201ENST00000443558 458 ntBASIC17.9■□□□□ 0.46
YBX1P67809 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.9■□□□□ 0.46
YBX1P67809 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.9■□□□□ 0.46
YBX1P67809 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.9■□□□□ 0.46
YBX1P67809 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
YBX1P67809 AC008764.6-201ENST00000595909 2069 ntBASIC17.9■□□□□ 0.46
YBX1P67809 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
YBX1P67809 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
YBX1P67809 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
YBX1P67809 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
YBX1P67809 AC034236.2-201ENST00000606662 1610 ntBASIC17.9■□□□□ 0.46
YBX1P67809 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
YBX1P67809 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
YBX1P67809 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
YBX1P67809 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
YBX1P67809 KRT8P50-201ENST00000562022 1438 ntBASIC17.89■□□□□ 0.46
YBX1P67809 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
YBX1P67809 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
YBX1P67809 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
YBX1P67809 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.89■□□□□ 0.45
YBX1P67809 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
YBX1P67809 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.89■□□□□ 0.45
YBX1P67809 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
YBX1P67809 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.89■□□□□ 0.45
YBX1P67809 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
YBX1P67809 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
YBX1P67809 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
YBX1P67809 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
YBX1P67809 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
YBX1P67809 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
YBX1P67809 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
YBX1P67809 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
YBX1P67809 SEC1P-202ENST00000473944 940 ntBASIC17.89■□□□□ 0.45
YBX1P67809 COX11P1-201ENST00000489116 835 ntBASIC17.89■□□□□ 0.45
YBX1P67809 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
YBX1P67809 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
YBX1P67809 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.89■□□□□ 0.45
YBX1P67809 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
YBX1P67809 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
YBX1P67809 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
YBX1P67809 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
YBX1P67809 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.89■□□□□ 0.45
YBX1P67809 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.89■□□□□ 0.45
YBX1P67809 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.89■□□□□ 0.45
YBX1P67809 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
YBX1P67809 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
YBX1P67809 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.89■□□□□ 0.45
YBX1P67809 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
YBX1P67809 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
YBX1P67809 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
YBX1P67809 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
YBX1P67809 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
YBX1P67809 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
YBX1P67809 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.89■□□□□ 0.45
YBX1P67809 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
YBX1P67809 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
YBX1P67809 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
YBX1P67809 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
YBX1P67809 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
YBX1P67809 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
YBX1P67809 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
YBX1P67809 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
YBX1P67809 AC135776.1-201ENST00000319817 2481 ntBASIC17.88■□□□□ 0.45
YBX1P67809 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
YBX1P67809 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
YBX1P67809 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
YBX1P67809 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.88■□□□□ 0.45
YBX1P67809 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.88■□□□□ 0.45
YBX1P67809 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
YBX1P67809 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
YBX1P67809 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.88■□□□□ 0.45
YBX1P67809 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
YBX1P67809 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.88■□□□□ 0.45
YBX1P67809 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
YBX1P67809 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.88■□□□□ 0.45
YBX1P67809 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
YBX1P67809 AL512604.3-201ENST00000569583 964 ntBASIC17.88■□□□□ 0.45
YBX1P67809 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.88■□□□□ 0.45
YBX1P67809 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
YBX1P67809 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
YBX1P67809 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
YBX1P67809 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
YBX1P67809 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
YBX1P67809 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
YBX1P67809 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
YBX1P67809 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.88■□□□□ 0.45
YBX1P67809 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
YBX1P67809 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
YBX1P67809 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.88■□□□□ 0.45
YBX1P67809 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.88■□□□□ 0.45
YBX1P67809 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.88■□□□□ 0.45
YBX1P67809 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
YBX1P67809 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
YBX1P67809 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
YBX1P67809 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
YBX1P67809 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms