Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CDC42P60953 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.8■□□□□ 0.28
CDC42P60953 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42P60953 Z85996.1-201ENST00000494644 937 ntBASIC16.8■□□□□ 0.28
CDC42P60953 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.8■□□□□ 0.28
CDC42P60953 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.8■□□□□ 0.28
CDC42P60953 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.8■□□□□ 0.28
CDC42P60953 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42P60953 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.8■□□□□ 0.28
CDC42P60953 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42P60953 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42P60953 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42P60953 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.8■□□□□ 0.28
CDC42P60953 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.8■□□□□ 0.28
CDC42P60953 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42P60953 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42P60953 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42P60953 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42P60953 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42P60953 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CDC42P60953 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.79■□□□□ 0.28
CDC42P60953 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDC42P60953 AL645608.8-201ENST00000606034 2086 ntBASIC16.79■□□□□ 0.28
CDC42P60953 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CDC42P60953 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CDC42P60953 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.79■□□□□ 0.28
CDC42P60953 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CDC42P60953 AL096828.2-201ENST00000567259 1965 ntBASIC16.79■□□□□ 0.28
CDC42P60953 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC42P60953 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC42P60953 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC42P60953 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDC42P60953 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CDC42P60953 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC42P60953 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.79■□□□□ 0.28
CDC42P60953 CROCCP5-201ENST00000436658 830 ntBASIC16.79■□□□□ 0.28
CDC42P60953 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDC42P60953 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CDC42P60953 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.79■□□□□ 0.28
CDC42P60953 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.79■□□□□ 0.28
CDC42P60953 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDC42P60953 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CDC42P60953 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC42P60953 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC42P60953 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC42P60953 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC42P60953 RCC2P3-201ENST00000418112 1537 ntBASIC16.79■□□□□ 0.28
CDC42P60953 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CDC42P60953 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDC42P60953 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.79■□□□□ 0.28
CDC42P60953 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.79■□□□□ 0.28
CDC42P60953 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.79■□□□□ 0.28
CDC42P60953 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.79■□□□□ 0.28
CDC42P60953 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC42P60953 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CDC42P60953 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDC42P60953 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CDC42P60953 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42P60953 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.78■□□□□ 0.28
CDC42P60953 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42P60953 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42P60953 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.78■□□□□ 0.28
CDC42P60953 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CDC42P60953 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42P60953 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDC42P60953 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDC42P60953 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42P60953 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42P60953 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CDC42P60953 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42P60953 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42P60953 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42P60953 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42P60953 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.78■□□□□ 0.28
CDC42P60953 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.78■□□□□ 0.28
CDC42P60953 KRT18P41-201ENST00000518924 1277 ntBASIC16.78■□□□□ 0.28
CDC42P60953 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42P60953 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.78■□□□□ 0.28
CDC42P60953 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.78■□□□□ 0.28
CDC42P60953 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CDC42P60953 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42P60953 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.78■□□□□ 0.28
CDC42P60953 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42P60953 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
CDC42P60953 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42P60953 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CDC42P60953 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.78■□□□□ 0.28
CDC42P60953 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.78■□□□□ 0.28
CDC42P60953 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42P60953 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CDC42P60953 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42P60953 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42P60953 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDC42P60953 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
CDC42P60953 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC42P60953 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC42P60953 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC42P60953 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDC42P60953 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC42P60953 GMCL1P1-201ENST00000463439 1581 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms