Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.67□□□□□ -0.22
CMC4P56277 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMC4P56277 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CMC4P56277 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CMC4P56277 AC112907.2-201ENST00000448639 330 ntBASIC13.67□□□□□ -0.22
CMC4P56277 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.67□□□□□ -0.22
CMC4P56277 AL359075.1-203ENST00000462729 1002 ntBASIC13.67□□□□□ -0.22
CMC4P56277 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.67□□□□□ -0.22
CMC4P56277 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.67□□□□□ -0.22
CMC4P56277 ZNF444P1-201ENST00000559497 298 ntBASIC13.67□□□□□ -0.22
CMC4P56277 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
CMC4P56277 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.67□□□□□ -0.22
CMC4P56277 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.67□□□□□ -0.22
CMC4P56277 AL121956.5-201ENST00000625261 221 ntBASIC13.67□□□□□ -0.22
CMC4P56277 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.67□□□□□ -0.22
CMC4P56277 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
CMC4P56277 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC13.67□□□□□ -0.22
CMC4P56277 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMC4P56277 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CMC4P56277 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.67□□□□□ -0.22
CMC4P56277 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CMC4P56277 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CMC4P56277 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CMC4P56277 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMC4P56277 AL138781.2-201ENST00000617896 1843 ntBASIC13.67□□□□□ -0.22
CMC4P56277 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CMC4P56277 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CMC4P56277 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.66□□□□□ -0.22
CMC4P56277 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.66□□□□□ -0.22
CMC4P56277 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMC4P56277 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.66□□□□□ -0.22
CMC4P56277 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMC4P56277 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
CMC4P56277 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMC4P56277 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMC4P56277 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.66□□□□□ -0.22
CMC4P56277 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMC4P56277 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.66□□□□□ -0.22
CMC4P56277 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMC4P56277 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CMC4P56277 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.66□□□□□ -0.22
CMC4P56277 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CMC4P56277 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CMC4P56277 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.66□□□□□ -0.22
CMC4P56277 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.66□□□□□ -0.22
CMC4P56277 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.66□□□□□ -0.22
CMC4P56277 AC087388.1-201ENST00000571370 1112 ntBASIC13.66□□□□□ -0.22
CMC4P56277 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC13.66□□□□□ -0.22
CMC4P56277 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.66□□□□□ -0.22
CMC4P56277 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMC4P56277 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CMC4P56277 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMC4P56277 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMC4P56277 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMC4P56277 AL391807.1-203ENST00000604392 2365 ntBASIC13.66□□□□□ -0.22
CMC4P56277 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMC4P56277 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CMC4P56277 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CMC4P56277 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CMC4P56277 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMC4P56277 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMC4P56277 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMC4P56277 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CMC4P56277 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC13.66□□□□□ -0.22
CMC4P56277 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMC4P56277 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CMC4P56277 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMC4P56277 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMC4P56277 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CMC4P56277 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMC4P56277 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CMC4P56277 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMC4P56277 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMC4P56277 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CMC4P56277 TNXA-203ENST00000507684 2038 ntBASIC13.65□□□□□ -0.22
CMC4P56277 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
CMC4P56277 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.65□□□□□ -0.22
CMC4P56277 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CMC4P56277 HLA-F-220ENST00000434407 884 ntBASIC13.65□□□□□ -0.22
CMC4P56277 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.65□□□□□ -0.22
CMC4P56277 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.65□□□□□ -0.22
CMC4P56277 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CMC4P56277 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CMC4P56277 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMC4P56277 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.65□□□□□ -0.22
CMC4P56277 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.65□□□□□ -0.22
CMC4P56277 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.65□□□□□ -0.22
CMC4P56277 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.65□□□□□ -0.22
CMC4P56277 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CMC4P56277 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMC4P56277 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMC4P56277 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CMC4P56277 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMC4P56277 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMC4P56277 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CMC4P56277 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMC4P56277 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
CMC4P56277 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMC4P56277 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMC4P56277 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms