Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFERP55789 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
GFERP55789 IGHV3-47-201ENST00000425060 335 ntBASIC17.5■□□□□ 0.39
GFERP55789 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.5■□□□□ 0.39
GFERP55789 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.5■□□□□ 0.39
GFERP55789 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.5■□□□□ 0.39
GFERP55789 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.5■□□□□ 0.39
GFERP55789 AC091304.2-201ENST00000564639 760 ntBASIC17.5■□□□□ 0.39
GFERP55789 AL121772.3-201ENST00000610840 674 ntBASIC17.5■□□□□ 0.39
GFERP55789 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
GFERP55789 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.5■□□□□ 0.39
GFERP55789 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.5■□□□□ 0.39
GFERP55789 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.5■□□□□ 0.39
GFERP55789 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.5■□□□□ 0.39
GFERP55789 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFERP55789 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFERP55789 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFERP55789 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFERP55789 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFERP55789 LINC01126-201ENST00000623515 1646 ntBASIC17.5■□□□□ 0.39
GFERP55789 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.5■□□□□ 0.39
GFERP55789 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFERP55789 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.5■□□□□ 0.39
GFERP55789 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFERP55789 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GFERP55789 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFERP55789 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
GFERP55789 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.49■□□□□ 0.39
GFERP55789 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
GFERP55789 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.49■□□□□ 0.39
GFERP55789 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFERP55789 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.49■□□□□ 0.39
GFERP55789 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFERP55789 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFERP55789 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
GFERP55789 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFERP55789 NSUN5P1-202ENST00000421140 1535 ntBASIC17.49■□□□□ 0.39
GFERP55789 NSUN5P2-203ENST00000457352 1529 ntBASIC17.49■□□□□ 0.39
GFERP55789 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFERP55789 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.49■□□□□ 0.39
GFERP55789 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GFERP55789 AC004870.1-201ENST00000315132 882 ntBASIC17.49■□□□□ 0.39
GFERP55789 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFERP55789 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.49■□□□□ 0.39
GFERP55789 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFERP55789 VENTXP7-201ENST00000475503 772 ntBASIC17.49■□□□□ 0.39
GFERP55789 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.49■□□□□ 0.39
GFERP55789 KRT18P31-201ENST00000506277 1292 ntBASIC17.49■□□□□ 0.39
GFERP55789 AC113404.2-201ENST00000507884 177 ntBASIC17.49■□□□□ 0.39
GFERP55789 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFERP55789 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.49■□□□□ 0.39
GFERP55789 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.49■□□□□ 0.39
GFERP55789 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.49■□□□□ 0.39
GFERP55789 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.49■□□□□ 0.39
GFERP55789 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.49■□□□□ 0.39
GFERP55789 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFERP55789 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.49■□□□□ 0.39
GFERP55789 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GFERP55789 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
GFERP55789 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.49■□□□□ 0.39
GFERP55789 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFERP55789 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
GFERP55789 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.48■□□□□ 0.39
GFERP55789 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.48■□□□□ 0.39
GFERP55789 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.48■□□□□ 0.39
GFERP55789 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.48■□□□□ 0.39
GFERP55789 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.48■□□□□ 0.39
GFERP55789 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
GFERP55789 AC246785.2-201ENST00000432512 513 ntBASIC17.48■□□□□ 0.39
GFERP55789 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.48■□□□□ 0.39
GFERP55789 EMBP1-201ENST00000458200 901 ntBASIC17.48■□□□□ 0.39
GFERP55789 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 AC011840.4-201ENST00000578471 627 ntBASIC17.48■□□□□ 0.39
GFERP55789 AC008687.5-201ENST00000593746 558 ntBASIC17.48■□□□□ 0.39
GFERP55789 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.48■□□□□ 0.39
GFERP55789 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.48■□□□□ 0.39
GFERP55789 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GFERP55789 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GFERP55789 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms