Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.1■□□□□ 0.33
PSMD4P55036 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.1■□□□□ 0.33
PSMD4P55036 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSMD4P55036 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSMD4P55036 AC113347.1-201ENST00000413321 391 ntBASIC17.1■□□□□ 0.33
PSMD4P55036 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PSMD4P55036 AL137013.1-201ENST00000432946 1228 ntBASIC17.1■□□□□ 0.33
PSMD4P55036 AC009947.2-201ENST00000444014 672 ntBASIC17.1■□□□□ 0.33
PSMD4P55036 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSMD4P55036 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PSMD4P55036 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.1■□□□□ 0.33
PSMD4P55036 MIR3180-4-201ENST00000582223 153 ntBASIC17.1■□□□□ 0.33
PSMD4P55036 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PSMD4P55036 AL031432.5-201ENST00000641059 760 ntBASIC17.1■□□□□ 0.33
PSMD4P55036 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSMD4P55036 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSMD4P55036 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSMD4P55036 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PSMD4P55036 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.1■□□□□ 0.33
PSMD4P55036 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSMD4P55036 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMD4P55036 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMD4P55036 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMD4P55036 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMD4P55036 AL499627.1-201ENST00000569373 2188 ntBASIC17.09■□□□□ 0.33
PSMD4P55036 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.09■□□□□ 0.33
PSMD4P55036 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMD4P55036 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.09■□□□□ 0.33
PSMD4P55036 AC009113.1-201ENST00000570267 2443 ntBASIC17.09■□□□□ 0.33
PSMD4P55036 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMD4P55036 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PSMD4P55036 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMD4P55036 AC211429.1-201ENST00000415277 523 ntBASIC17.09■□□□□ 0.33
PSMD4P55036 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
PSMD4P55036 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.09■□□□□ 0.33
PSMD4P55036 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.09■□□□□ 0.33
PSMD4P55036 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.09■□□□□ 0.33
PSMD4P55036 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.09■□□□□ 0.33
PSMD4P55036 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMD4P55036 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.09■□□□□ 0.33
PSMD4P55036 AC141257.4-201ENST00000634557 245 ntBASIC17.09■□□□□ 0.33
PSMD4P55036 AC136944.6-201ENST00000634818 245 ntBASIC17.09■□□□□ 0.33
PSMD4P55036 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PSMD4P55036 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PSMD4P55036 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMD4P55036 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.09■□□□□ 0.33
PSMD4P55036 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMD4P55036 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PSMD4P55036 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.09■□□□□ 0.33
PSMD4P55036 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.09■□□□□ 0.33
PSMD4P55036 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMD4P55036 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PSMD4P55036 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PSMD4P55036 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PSMD4P55036 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PSMD4P55036 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.08■□□□□ 0.33
PSMD4P55036 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PSMD4P55036 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PSMD4P55036 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PSMD4P55036 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PSMD4P55036 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
PSMD4P55036 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PSMD4P55036 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.08■□□□□ 0.32
PSMD4P55036 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PSMD4P55036 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PSMD4P55036 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PSMD4P55036 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PSMD4P55036 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PSMD4P55036 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PSMD4P55036 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PSMD4P55036 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.08■□□□□ 0.32
PSMD4P55036 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.08■□□□□ 0.32
PSMD4P55036 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.08■□□□□ 0.32
PSMD4P55036 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PSMD4P55036 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.08■□□□□ 0.32
PSMD4P55036 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.08■□□□□ 0.32
PSMD4P55036 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.08■□□□□ 0.32
PSMD4P55036 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PSMD4P55036 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PSMD4P55036 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
PSMD4P55036 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
PSMD4P55036 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PSMD4P55036 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PSMD4P55036 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PSMD4P55036 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PSMD4P55036 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PSMD4P55036 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.07■□□□□ 0.32
PSMD4P55036 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.07■□□□□ 0.32
PSMD4P55036 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.07■□□□□ 0.32
PSMD4P55036 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PSMD4P55036 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
PSMD4P55036 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PSMD4P55036 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.07■□□□□ 0.32
PSMD4P55036 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PSMD4P55036 KRT8P50-201ENST00000562022 1438 ntBASIC17.07■□□□□ 0.32
PSMD4P55036 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PSMD4P55036 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PSMD4P55036 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PSMD4P55036 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PSMD4P55036 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms