Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3P54252 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3P54252 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3P54252 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3P54252 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3P54252 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
ATXN3P54252 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3P54252 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3P54252 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.72■□□□□ 0.59
ATXN3P54252 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.72■□□□□ 0.59
ATXN3P54252 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.72■□□□□ 0.59
ATXN3P54252 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.72■□□□□ 0.59
ATXN3P54252 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3P54252 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3P54252 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3P54252 RASA4DP-201ENST00000460726 1199 ntBASIC18.72■□□□□ 0.59
ATXN3P54252 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.72■□□□□ 0.59
ATXN3P54252 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3P54252 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.72■□□□□ 0.59
ATXN3P54252 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3P54252 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ATXN3P54252 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
ATXN3P54252 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
ATXN3P54252 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.72■□□□□ 0.59
ATXN3P54252 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3P54252 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
ATXN3P54252 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3P54252 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3P54252 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.71■□□□□ 0.59
ATXN3P54252 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
ATXN3P54252 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3P54252 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3P54252 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.71■□□□□ 0.59
ATXN3P54252 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3P54252 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3P54252 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ATXN3P54252 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3P54252 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3P54252 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3P54252 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.71■□□□□ 0.59
ATXN3P54252 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.71■□□□□ 0.59
ATXN3P54252 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.71■□□□□ 0.59
ATXN3P54252 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3P54252 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ATXN3P54252 AC011498.5-201ENST00000592027 486 ntBASIC18.71■□□□□ 0.59
ATXN3P54252 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3P54252 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3P54252 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.71■□□□□ 0.59
ATXN3P54252 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.71■□□□□ 0.59
ATXN3P54252 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3P54252 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3P54252 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3P54252 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3P54252 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3P54252 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
ATXN3P54252 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATXN3P54252 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ATXN3P54252 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ATXN3P54252 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATXN3P54252 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATXN3P54252 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATXN3P54252 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATXN3P54252 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ATXN3P54252 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATXN3P54252 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATXN3P54252 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATXN3P54252 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATXN3P54252 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATXN3P54252 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ATXN3P54252 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATXN3P54252 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
ATXN3P54252 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATXN3P54252 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.7■□□□□ 0.58
ATXN3P54252 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
ATXN3P54252 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATXN3P54252 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ATXN3P54252 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATXN3P54252 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.7■□□□□ 0.58
ATXN3P54252 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ATXN3P54252 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
ATXN3P54252 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATXN3P54252 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.7■□□□□ 0.58
ATXN3P54252 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ATXN3P54252 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATXN3P54252 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATXN3P54252 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.69■□□□□ 0.58
ATXN3P54252 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATXN3P54252 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
ATXN3P54252 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATXN3P54252 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.69■□□□□ 0.58
ATXN3P54252 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATXN3P54252 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.69■□□□□ 0.58
ATXN3P54252 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATXN3P54252 KRT8P10-201ENST00000450021 1447 ntBASIC18.69■□□□□ 0.58
ATXN3P54252 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATXN3P54252 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATXN3P54252 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.69■□□□□ 0.58
ATXN3P54252 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATXN3P54252 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATXN3P54252 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms