Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.36■□□□□ 0.53
CSNK1DP48730 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSNK1DP48730 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1DP48730 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1DP48730 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CSNK1DP48730 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1DP48730 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1DP48730 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.35■□□□□ 0.53
CSNK1DP48730 AC093677.2-201ENST00000600169 1863 ntBASIC18.35■□□□□ 0.53
CSNK1DP48730 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CSNK1DP48730 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1DP48730 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1DP48730 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CSNK1DP48730 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1DP48730 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1DP48730 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1DP48730 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CSNK1DP48730 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1DP48730 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CSNK1DP48730 LINC00167-201ENST00000530583 1419 ntBASIC18.35■□□□□ 0.53
CSNK1DP48730 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1DP48730 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.35■□□□□ 0.53
CSNK1DP48730 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1DP48730 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1DP48730 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.35■□□□□ 0.53
CSNK1DP48730 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1DP48730 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.35■□□□□ 0.53
CSNK1DP48730 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1DP48730 AC090616.6-201ENST00000582640 721 ntBASIC18.35■□□□□ 0.53
CSNK1DP48730 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1DP48730 AC069148.1-201ENST00000608741 768 ntBASIC18.35■□□□□ 0.53
CSNK1DP48730 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.35■□□□□ 0.53
CSNK1DP48730 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1DP48730 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CSNK1DP48730 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CSNK1DP48730 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1DP48730 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1DP48730 PHGDH-209ENST00000641074 1780 ntBASIC18.35■□□□□ 0.53
CSNK1DP48730 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1DP48730 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSNK1DP48730 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CSNK1DP48730 AC093010.1-201ENST00000473625 1624 ntBASIC18.34■□□□□ 0.53
CSNK1DP48730 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.34■□□□□ 0.53
CSNK1DP48730 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1DP48730 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CSNK1DP48730 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.34■□□□□ 0.53
CSNK1DP48730 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1DP48730 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.34■□□□□ 0.53
CSNK1DP48730 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CSNK1DP48730 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1DP48730 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1DP48730 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1DP48730 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.34■□□□□ 0.53
CSNK1DP48730 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1DP48730 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1DP48730 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.34■□□□□ 0.53
CSNK1DP48730 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1DP48730 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1DP48730 UPK3BP1-201ENST00000428678 509 ntBASIC18.34■□□□□ 0.53
CSNK1DP48730 CHCHD2P8-201ENST00000429873 447 ntBASIC18.34■□□□□ 0.53
CSNK1DP48730 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.34■□□□□ 0.53
CSNK1DP48730 TSSC2-201ENST00000450217 709 ntBASIC18.34■□□□□ 0.53
CSNK1DP48730 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1DP48730 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1DP48730 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1DP48730 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.34■□□□□ 0.53
CSNK1DP48730 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.34■□□□□ 0.53
CSNK1DP48730 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1DP48730 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1DP48730 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1DP48730 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1DP48730 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CSNK1DP48730 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1DP48730 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1DP48730 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1DP48730 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CSNK1DP48730 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1DP48730 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1DP48730 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1DP48730 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1DP48730 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1DP48730 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1DP48730 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.33■□□□□ 0.53
CSNK1DP48730 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1DP48730 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1DP48730 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1DP48730 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1DP48730 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.33■□□□□ 0.52
CSNK1DP48730 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1DP48730 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1DP48730 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1DP48730 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.33■□□□□ 0.52
CSNK1DP48730 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.33■□□□□ 0.52
CSNK1DP48730 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.33■□□□□ 0.52
CSNK1DP48730 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.33■□□□□ 0.52
CSNK1DP48730 RN7SL606P-201ENST00000472779 293 ntBASIC18.33■□□□□ 0.52
CSNK1DP48730 GUSBP12-201ENST00000513727 720 ntBASIC18.33■□□□□ 0.52
CSNK1DP48730 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CSNK1DP48730 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.33■□□□□ 0.52
CSNK1DP48730 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms