Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A12P48065 AC008764.6-201ENST00000595909 2069 ntBASIC17.71■□□□□ 0.43
SLC6A12P48065 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A12P48065 FLJ13224-201ENST00000313737 1514 ntBASIC17.71■□□□□ 0.43
SLC6A12P48065 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SLC6A12P48065 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A12P48065 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
SLC6A12P48065 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A12P48065 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SLC6A12P48065 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A12P48065 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SLC6A12P48065 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.71■□□□□ 0.42
SLC6A12P48065 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.71■□□□□ 0.42
SLC6A12P48065 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
SLC6A12P48065 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SLC6A12P48065 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SLC6A12P48065 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SLC6A12P48065 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC6A12P48065 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC6A12P48065 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC6A12P48065 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC6A12P48065 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC6A12P48065 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC6A12P48065 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC6A12P48065 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC6A12P48065 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC6A12P48065 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC6A12P48065 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC6A12P48065 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC6A12P48065 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC6A12P48065 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC6A12P48065 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC6A12P48065 AL023973.1-201ENST00000624619 620 ntBASIC17.7■□□□□ 0.42
SLC6A12P48065 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC6A12P48065 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC6A12P48065 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.7■□□□□ 0.42
SLC6A12P48065 AC073508.3-201ENST00000619697 1419 ntBASIC17.7■□□□□ 0.42
SLC6A12P48065 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC6A12P48065 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC6A12P48065 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC6A12P48065 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC6A12P48065 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC6A12P48065 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SLC6A12P48065 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A12P48065 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.69■□□□□ 0.42
SLC6A12P48065 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A12P48065 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A12P48065 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A12P48065 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SLC6A12P48065 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A12P48065 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A12P48065 TERF1P1-201ENST00000311003 1181 ntBASIC17.69■□□□□ 0.42
SLC6A12P48065 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.69■□□□□ 0.42
SLC6A12P48065 LIN28AP1-201ENST00000429574 405 ntBASIC17.69■□□□□ 0.42
SLC6A12P48065 PVRIG2P-201ENST00000435460 978 ntBASIC17.69■□□□□ 0.42
SLC6A12P48065 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC6A12P48065 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
SLC6A12P48065 AC005363.2-201ENST00000618631 242 ntBASIC17.69■□□□□ 0.42
SLC6A12P48065 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A12P48065 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A12P48065 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SLC6A12P48065 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A12P48065 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC6A12P48065 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A12P48065 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A12P48065 AC018470.1-201ENST00000624790 3129 ntBASIC17.69■□□□□ 0.42
SLC6A12P48065 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC6A12P48065 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A12P48065 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SLC6A12P48065 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC6A12P48065 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC6A12P48065 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A12P48065 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A12P48065 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A12P48065 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC6A12P48065 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A12P48065 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SLC6A12P48065 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A12P48065 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A12P48065 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A12P48065 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A12P48065 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
SLC6A12P48065 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A12P48065 COX11P1-201ENST00000489116 835 ntBASIC17.68■□□□□ 0.42
SLC6A12P48065 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SLC6A12P48065 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC6A12P48065 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC6A12P48065 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A12P48065 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SLC6A12P48065 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A12P48065 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A12P48065 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A12P48065 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A12P48065 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC6A12P48065 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A12P48065 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC6A12P48065 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC6A12P48065 AC068880.1-201ENST00000507289 2297 ntBASIC17.68■□□□□ 0.42
SLC6A12P48065 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A12P48065 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms