Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLP35914 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
HMGCLP35914 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLP35914 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLP35914 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLP35914 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.25■□□□□ 0.51
HMGCLP35914 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.25■□□□□ 0.51
HMGCLP35914 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLP35914 AL590326.2-201ENST00000625139 305 ntBASIC18.25■□□□□ 0.51
HMGCLP35914 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.25■□□□□ 0.51
HMGCLP35914 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLP35914 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLP35914 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.25■□□□□ 0.51
HMGCLP35914 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLP35914 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.25■□□□□ 0.51
HMGCLP35914 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLP35914 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLP35914 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLP35914 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLP35914 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
HMGCLP35914 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLP35914 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLP35914 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLP35914 PHGDH-209ENST00000641074 1780 ntBASIC18.25■□□□□ 0.51
HMGCLP35914 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLP35914 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.24■□□□□ 0.51
HMGCLP35914 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLP35914 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLP35914 LINC01311-201ENST00000565162 1445 ntBASIC18.24■□□□□ 0.51
HMGCLP35914 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLP35914 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLP35914 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HMGCLP35914 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
HMGCLP35914 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLP35914 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLP35914 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLP35914 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLP35914 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.24■□□□□ 0.51
HMGCLP35914 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.24■□□□□ 0.51
HMGCLP35914 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.24■□□□□ 0.51
HMGCLP35914 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.24■□□□□ 0.51
HMGCLP35914 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.24■□□□□ 0.51
HMGCLP35914 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLP35914 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
HMGCLP35914 NEFHP1-201ENST00000412845 2629 ntBASIC18.24■□□□□ 0.51
HMGCLP35914 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLP35914 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.24■□□□□ 0.51
HMGCLP35914 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.24■□□□□ 0.51
HMGCLP35914 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HMGCLP35914 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLP35914 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLP35914 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCLP35914 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HMGCLP35914 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLP35914 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGCLP35914 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLP35914 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLP35914 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGCLP35914 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLP35914 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLP35914 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
HMGCLP35914 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLP35914 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGCLP35914 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
HMGCLP35914 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLP35914 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLP35914 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGCLP35914 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLP35914 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLP35914 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLP35914 AL671277.2-201ENST00000458060 996 ntBASIC18.23■□□□□ 0.51
HMGCLP35914 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLP35914 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HMGCLP35914 AC024563.2-201ENST00000603282 481 ntBASIC18.23■□□□□ 0.51
HMGCLP35914 AC083849.1-201ENST00000615227 514 ntBASIC18.23■□□□□ 0.51
HMGCLP35914 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HMGCLP35914 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGCLP35914 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGCLP35914 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGCLP35914 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGCLP35914 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLP35914 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLP35914 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HMGCLP35914 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLP35914 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCLP35914 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGCLP35914 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGCLP35914 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.22■□□□□ 0.51
HMGCLP35914 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCLP35914 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCLP35914 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
HMGCLP35914 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
HMGCLP35914 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCLP35914 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCLP35914 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCLP35914 MIR662-201ENST00000384847 95 ntBASIC18.22■□□□□ 0.51
HMGCLP35914 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HMGCLP35914 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCLP35914 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.22■□□□□ 0.51
HMGCLP35914 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms