Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
COL4A5P29400 COA5-202ENST00000409997 557 ntTSL 4 BASIC21.96■■□□□ 1.11
COL4A5P29400 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL4A5P29400 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL4A5P29400 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.96■■□□□ 1.11
COL4A5P29400 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL4A5P29400 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
COL4A5P29400 LINC01126-201ENST00000623515 1646 ntBASIC21.95■■□□□ 1.11
COL4A5P29400 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
COL4A5P29400 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL4A5P29400 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL4A5P29400 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
COL4A5P29400 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.95■■□□□ 1.1
COL4A5P29400 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC21.95■■□□□ 1.1
COL4A5P29400 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.95■■□□□ 1.1
COL4A5P29400 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL4A5P29400 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.95■■□□□ 1.1
COL4A5P29400 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL4A5P29400 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.95■■□□□ 1.1
COL4A5P29400 LINC00602-201ENST00000629776 2065 ntBASIC21.95■■□□□ 1.1
COL4A5P29400 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.95■■□□□ 1.1
COL4A5P29400 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL4A5P29400 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
COL4A5P29400 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL4A5P29400 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
COL4A5P29400 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL4A5P29400 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL4A5P29400 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC21.95■■□□□ 1.1
COL4A5P29400 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL4A5P29400 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC21.95■■□□□ 1.1
COL4A5P29400 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC21.95■■□□□ 1.1
COL4A5P29400 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL4A5P29400 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL4A5P29400 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL4A5P29400 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL4A5P29400 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.94■■□□□ 1.1
COL4A5P29400 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL4A5P29400 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.94■■□□□ 1.1
COL4A5P29400 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL4A5P29400 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL4A5P29400 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL4A5P29400 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL4A5P29400 LBH-203ENST00000404397 543 ntTSL 4 BASIC21.94■■□□□ 1.1
COL4A5P29400 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.94■■□□□ 1.1
COL4A5P29400 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.94■■□□□ 1.1
COL4A5P29400 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL4A5P29400 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.94■■□□□ 1.1
COL4A5P29400 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
COL4A5P29400 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL4A5P29400 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
COL4A5P29400 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
COL4A5P29400 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL4A5P29400 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL4A5P29400 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.94■■□□□ 1.1
COL4A5P29400 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL4A5P29400 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL4A5P29400 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL4A5P29400 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL4A5P29400 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.93■■□□□ 1.1
COL4A5P29400 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL4A5P29400 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.93■■□□□ 1.1
COL4A5P29400 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.93■■□□□ 1.1
COL4A5P29400 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL4A5P29400 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC21.93■■□□□ 1.1
COL4A5P29400 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL4A5P29400 AC073621.1-201ENST00000392730 636 ntBASIC21.93■■□□□ 1.1
COL4A5P29400 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC21.93■■□□□ 1.1
COL4A5P29400 LAGE3P1-201ENST00000425356 484 ntBASIC21.93■■□□□ 1.1
COL4A5P29400 METTL21AP1-201ENST00000438852 635 ntBASIC21.93■■□□□ 1.1
COL4A5P29400 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.93■■□□□ 1.1
COL4A5P29400 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.93■■□□□ 1.1
COL4A5P29400 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.93■■□□□ 1.1
COL4A5P29400 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.93■■□□□ 1.1
COL4A5P29400 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL4A5P29400 AL049812.1-201ENST00000432563 2267 ntBASIC21.93■■□□□ 1.1
COL4A5P29400 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
COL4A5P29400 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL4A5P29400 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
COL4A5P29400 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL4A5P29400 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
COL4A5P29400 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL4A5P29400 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL4A5P29400 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
COL4A5P29400 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.92■■□□□ 1.1
COL4A5P29400 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL4A5P29400 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC21.92■■□□□ 1.1
COL4A5P29400 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.92■■□□□ 1.1
COL4A5P29400 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL4A5P29400 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.92■■□□□ 1.1
COL4A5P29400 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.92■■□□□ 1.1
COL4A5P29400 MIR3687-2-201ENST00000577708 61 ntBASIC21.92■■□□□ 1.1
COL4A5P29400 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC21.92■■□□□ 1.1
COL4A5P29400 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.92■■□□□ 1.1
COL4A5P29400 MIR3687-1-201ENST00000614492 61 ntBASIC21.92■■□□□ 1.1
COL4A5P29400 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL4A5P29400 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.92■■□□□ 1.1
COL4A5P29400 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL4A5P29400 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL4A5P29400 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.92■■□□□ 1.1
COL4A5P29400 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms