Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.63■□□□□ 0.25
GDF1P27539 AC005332.3-201ENST00000589904 676 ntBASIC16.63■□□□□ 0.25
GDF1P27539 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GDF1P27539 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
GDF1P27539 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.63■□□□□ 0.25
GDF1P27539 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.63■□□□□ 0.25
GDF1P27539 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDF1P27539 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.63■□□□□ 0.25
GDF1P27539 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GDF1P27539 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GDF1P27539 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.62■□□□□ 0.25
GDF1P27539 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GDF1P27539 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.62■□□□□ 0.25
GDF1P27539 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GDF1P27539 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GDF1P27539 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GDF1P27539 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
GDF1P27539 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
GDF1P27539 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.62■□□□□ 0.25
GDF1P27539 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GDF1P27539 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
GDF1P27539 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GDF1P27539 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.62■□□□□ 0.25
GDF1P27539 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.62■□□□□ 0.25
GDF1P27539 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.62■□□□□ 0.25
GDF1P27539 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GDF1P27539 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
GDF1P27539 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.62■□□□□ 0.25
GDF1P27539 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.62■□□□□ 0.25
GDF1P27539 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.62■□□□□ 0.25
GDF1P27539 GPR32P1-201ENST00000601788 811 ntBASIC16.62■□□□□ 0.25
GDF1P27539 AC092119.3-201ENST00000612618 583 ntBASIC16.62■□□□□ 0.25
GDF1P27539 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.62■□□□□ 0.25
GDF1P27539 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.62■□□□□ 0.25
GDF1P27539 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GDF1P27539 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GDF1P27539 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GDF1P27539 AC016734.2-201ENST00000624325 1377 ntBASIC16.62■□□□□ 0.25
GDF1P27539 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GDF1P27539 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GDF1P27539 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GDF1P27539 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GDF1P27539 AP000974.1-201ENST00000623909 2387 ntBASIC16.62■□□□□ 0.25
GDF1P27539 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GDF1P27539 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GDF1P27539 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
GDF1P27539 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GDF1P27539 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GDF1P27539 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GDF1P27539 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GDF1P27539 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.61■□□□□ 0.25
GDF1P27539 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.61■□□□□ 0.25
GDF1P27539 ATP5G2P1-201ENST00000433580 426 ntBASIC16.61■□□□□ 0.25
GDF1P27539 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.61■□□□□ 0.25
GDF1P27539 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.61■□□□□ 0.25
GDF1P27539 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.61■□□□□ 0.25
GDF1P27539 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.61■□□□□ 0.25
GDF1P27539 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GDF1P27539 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
GDF1P27539 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.61■□□□□ 0.25
GDF1P27539 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GDF1P27539 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
GDF1P27539 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
GDF1P27539 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GDF1P27539 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GDF1P27539 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GDF1P27539 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
GDF1P27539 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
GDF1P27539 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.61■□□□□ 0.25
GDF1P27539 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.61■□□□□ 0.25
GDF1P27539 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
GDF1P27539 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
GDF1P27539 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.6■□□□□ 0.25
GDF1P27539 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
GDF1P27539 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
GDF1P27539 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 CHCHD2P8-201ENST00000429873 447 ntBASIC16.6■□□□□ 0.25
GDF1P27539 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.6■□□□□ 0.25
GDF1P27539 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.6■□□□□ 0.25
GDF1P27539 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.6■□□□□ 0.25
GDF1P27539 AC008687.5-201ENST00000593746 558 ntBASIC16.6■□□□□ 0.25
GDF1P27539 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
GDF1P27539 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.6■□□□□ 0.25
GDF1P27539 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms