Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LAMA1P25391 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LAMA1P25391 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LAMA1P25391 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LAMA1P25391 AC112482.1-201ENST00000492080 688 ntBASIC17.9■□□□□ 0.46
LAMA1P25391 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.9■□□□□ 0.46
LAMA1P25391 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LAMA1P25391 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LAMA1P25391 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LAMA1P25391 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
LAMA1P25391 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LAMA1P25391 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LAMA1P25391 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LAMA1P25391 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LAMA1P25391 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.9■□□□□ 0.46
LAMA1P25391 AL356488.2-201ENST00000602755 427 ntBASIC17.9■□□□□ 0.46
LAMA1P25391 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LAMA1P25391 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LAMA1P25391 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.9■□□□□ 0.46
LAMA1P25391 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LAMA1P25391 HEIH-201ENST00000623091 1652 ntBASIC17.9■□□□□ 0.46
LAMA1P25391 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.9■□□□□ 0.46
LAMA1P25391 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LAMA1P25391 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LAMA1P25391 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LAMA1P25391 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LAMA1P25391 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.9■□□□□ 0.46
LAMA1P25391 RNA5SP415-201ENST00000517246 115 ntBASIC17.9■□□□□ 0.46
LAMA1P25391 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LAMA1P25391 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LAMA1P25391 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.89■□□□□ 0.46
LAMA1P25391 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
LAMA1P25391 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
LAMA1P25391 ZNF259P1-201ENST00000407656 1365 ntBASIC17.89■□□□□ 0.46
LAMA1P25391 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LAMA1P25391 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LAMA1P25391 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.89■□□□□ 0.45
LAMA1P25391 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.89■□□□□ 0.45
LAMA1P25391 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LAMA1P25391 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.89■□□□□ 0.45
LAMA1P25391 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.89■□□□□ 0.45
LAMA1P25391 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.89■□□□□ 0.45
LAMA1P25391 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LAMA1P25391 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LAMA1P25391 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LAMA1P25391 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.89■□□□□ 0.45
LAMA1P25391 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LAMA1P25391 RCN1P2-201ENST00000398357 915 ntBASIC17.89■□□□□ 0.45
LAMA1P25391 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.89■□□□□ 0.45
LAMA1P25391 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.89■□□□□ 0.45
LAMA1P25391 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LAMA1P25391 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
LAMA1P25391 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.89■□□□□ 0.45
LAMA1P25391 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.89■□□□□ 0.45
LAMA1P25391 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
LAMA1P25391 AC141586.3-201ENST00000562166 1838 ntBASIC17.88■□□□□ 0.45
LAMA1P25391 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LAMA1P25391 AC211486.1-202ENST00000416371 468 ntBASIC17.88■□□□□ 0.45
LAMA1P25391 AC211476.1-201ENST00000503899 468 ntBASIC17.88■□□□□ 0.45
LAMA1P25391 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.88■□□□□ 0.45
LAMA1P25391 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.88■□□□□ 0.45
LAMA1P25391 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.88■□□□□ 0.45
LAMA1P25391 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.88■□□□□ 0.45
LAMA1P25391 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LAMA1P25391 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LAMA1P25391 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LAMA1P25391 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.88■□□□□ 0.45
LAMA1P25391 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LAMA1P25391 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LAMA1P25391 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.88■□□□□ 0.45
LAMA1P25391 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LAMA1P25391 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.88■□□□□ 0.45
LAMA1P25391 AC113404.2-201ENST00000507884 177 ntBASIC17.88■□□□□ 0.45
LAMA1P25391 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.88■□□□□ 0.45
LAMA1P25391 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LAMA1P25391 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.88■□□□□ 0.45
LAMA1P25391 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.88■□□□□ 0.45
LAMA1P25391 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LAMA1P25391 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.87■□□□□ 0.45
LAMA1P25391 AC021087.4-201ENST00000563761 564 ntBASIC17.87■□□□□ 0.45
LAMA1P25391 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.87■□□□□ 0.45
LAMA1P25391 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LAMA1P25391 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LAMA1P25391 AL163051.1-201ENST00000569214 1512 ntBASIC17.87■□□□□ 0.45
LAMA1P25391 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.87■□□□□ 0.45
LAMA1P25391 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.87■□□□□ 0.45
LAMA1P25391 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LAMA1P25391 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.87■□□□□ 0.45
LAMA1P25391 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.87■□□□□ 0.45
LAMA1P25391 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.87■□□□□ 0.45
LAMA1P25391 AC004967.1-201ENST00000453589 447 ntBASIC17.87■□□□□ 0.45
LAMA1P25391 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.87■□□□□ 0.45
LAMA1P25391 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.87■□□□□ 0.45
LAMA1P25391 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
LAMA1P25391 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LAMA1P25391 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LAMA1P25391 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.87■□□□□ 0.45
LAMA1P25391 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LAMA1P25391 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LAMA1P25391 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms