Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.98■□□□□ 0.79
RFX1P22670 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.98■□□□□ 0.79
RFX1P22670 TSPY17P-201ENST00000450329 467 ntBASIC19.98■□□□□ 0.79
RFX1P22670 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.98■□□□□ 0.79
RFX1P22670 AL023803.3-201ENST00000615559 522 ntBASIC19.98■□□□□ 0.79
RFX1P22670 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFX1P22670 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX1P22670 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RFX1P22670 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.98■□□□□ 0.79
RFX1P22670 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
RFX1P22670 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX1P22670 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
RFX1P22670 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFX1P22670 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
RFX1P22670 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFX1P22670 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RFX1P22670 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFX1P22670 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.98■□□□□ 0.79
RFX1P22670 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX1P22670 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX1P22670 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RFX1P22670 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX1P22670 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.97■□□□□ 0.79
RFX1P22670 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RFX1P22670 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX1P22670 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX1P22670 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RFX1P22670 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.97■□□□□ 0.79
RFX1P22670 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
RFX1P22670 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RFX1P22670 VENTXP5-201ENST00000523979 775 ntBASIC19.97■□□□□ 0.79
RFX1P22670 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.97■□□□□ 0.79
RFX1P22670 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.97■□□□□ 0.79
RFX1P22670 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.97■□□□□ 0.79
RFX1P22670 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX1P22670 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
RFX1P22670 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RFX1P22670 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.97■□□□□ 0.79
RFX1P22670 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
RFX1P22670 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX1P22670 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX1P22670 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX1P22670 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFX1P22670 KRT8P7-201ENST00000533003 1432 ntBASIC19.96■□□□□ 0.79
RFX1P22670 HOXB1-202ENST00000577092 1414 ntBASIC19.96■□□□□ 0.79
RFX1P22670 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX1P22670 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX1P22670 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX1P22670 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX1P22670 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.96■□□□□ 0.79
RFX1P22670 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX1P22670 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.96■□□□□ 0.79
RFX1P22670 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RFX1P22670 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.96■□□□□ 0.79
RFX1P22670 AL353719.1-201ENST00000566847 864 ntBASIC19.96■□□□□ 0.79
RFX1P22670 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.96■□□□□ 0.79
RFX1P22670 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.96■□□□□ 0.79
RFX1P22670 MIR4674-201ENST00000582457 87 ntBASIC19.96■□□□□ 0.79
RFX1P22670 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.96■□□□□ 0.79
RFX1P22670 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFX1P22670 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.96■□□□□ 0.79
RFX1P22670 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
RFX1P22670 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RFX1P22670 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RFX1P22670 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX1P22670 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX1P22670 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFX1P22670 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX1P22670 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX1P22670 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
RFX1P22670 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX1P22670 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX1P22670 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFX1P22670 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.95■□□□□ 0.78
RFX1P22670 KRT8P50-201ENST00000562022 1438 ntBASIC19.95■□□□□ 0.78
RFX1P22670 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFX1P22670 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.95■□□□□ 0.78
RFX1P22670 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX1P22670 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX1P22670 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFX1P22670 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.95■□□□□ 0.78
RFX1P22670 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX1P22670 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX1P22670 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX1P22670 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX1P22670 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX1P22670 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX1P22670 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX1P22670 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX1P22670 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.95■□□□□ 0.78
RFX1P22670 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFX1P22670 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RFX1P22670 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFX1P22670 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RFX1P22670 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.95■□□□□ 0.78
RFX1P22670 AL023973.1-201ENST00000624619 620 ntBASIC19.95■□□□□ 0.78
RFX1P22670 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RFX1P22670 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX1P22670 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFX1P22670 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms