Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRAFP15056 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
BRAFP15056 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRAFP15056 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRAFP15056 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRAFP15056 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRAFP15056 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BRAFP15056 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
BRAFP15056 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRAFP15056 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.89■□□□□ 0.61
BRAFP15056 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRAFP15056 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
BRAFP15056 HEIH-201ENST00000623091 1652 ntBASIC18.89■□□□□ 0.61
BRAFP15056 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRAFP15056 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
BRAFP15056 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.88■□□□□ 0.61
BRAFP15056 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.88■□□□□ 0.61
BRAFP15056 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.88■□□□□ 0.61
BRAFP15056 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRAFP15056 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRAFP15056 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRAFP15056 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRAFP15056 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.88■□□□□ 0.61
BRAFP15056 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRAFP15056 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRAFP15056 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRAFP15056 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRAFP15056 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRAFP15056 AC211429.1-201ENST00000415277 523 ntBASIC18.88■□□□□ 0.61
BRAFP15056 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRAFP15056 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
BRAFP15056 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.88■□□□□ 0.61
BRAFP15056 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRAFP15056 AL160286.2-201ENST00000567150 934 ntBASIC18.88■□□□□ 0.61
BRAFP15056 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.88■□□□□ 0.61
BRAFP15056 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.88■□□□□ 0.61
BRAFP15056 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRAFP15056 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRAFP15056 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.88■□□□□ 0.61
BRAFP15056 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
BRAFP15056 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.88■□□□□ 0.61
BRAFP15056 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.88■□□□□ 0.61
BRAFP15056 KRT8P9-201ENST00000558927 1449 ntBASIC18.88■□□□□ 0.61
BRAFP15056 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRAFP15056 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRAFP15056 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
BRAFP15056 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRAFP15056 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
BRAFP15056 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRAFP15056 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRAFP15056 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRAFP15056 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
BRAFP15056 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRAFP15056 MMP23A-201ENST00000234610 1017 ntBASIC18.87■□□□□ 0.61
BRAFP15056 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRAFP15056 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRAFP15056 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRAFP15056 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRAFP15056 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRAFP15056 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRAFP15056 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.87■□□□□ 0.61
BRAFP15056 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRAFP15056 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRAFP15056 AL390955.1-201ENST00000428694 934 ntBASIC18.87■□□□□ 0.61
BRAFP15056 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
BRAFP15056 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRAFP15056 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.87■□□□□ 0.61
BRAFP15056 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.87■□□□□ 0.61
BRAFP15056 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
BRAFP15056 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.87■□□□□ 0.61
BRAFP15056 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
BRAFP15056 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
BRAFP15056 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
BRAFP15056 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
BRAFP15056 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRAFP15056 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRAFP15056 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRAFP15056 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRAFP15056 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRAFP15056 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRAFP15056 PRORSD1P-202ENST00000563365 2154 ntBASIC18.86■□□□□ 0.61
BRAFP15056 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRAFP15056 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
BRAFP15056 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRAFP15056 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRAFP15056 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
BRAFP15056 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
BRAFP15056 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRAFP15056 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRAFP15056 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRAFP15056 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.86■□□□□ 0.61
BRAFP15056 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
BRAFP15056 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRAFP15056 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRAFP15056 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
BRAFP15056 MIR1238-201ENST00000408483 83 ntBASIC18.86■□□□□ 0.61
BRAFP15056 AC004951.3-201ENST00000418645 1148 ntBASIC18.86■□□□□ 0.61
BRAFP15056 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.86■□□□□ 0.61
BRAFP15056 FITM1-202ENST00000559294 800 ntBASIC18.86■□□□□ 0.61
BRAFP15056 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms