Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC13.68□□□□□ -0.22
SMIM17P0DL12 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.68□□□□□ -0.22
SMIM17P0DL12 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM17P0DL12 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM17P0DL12 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SMIM17P0DL12 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC13.68□□□□□ -0.22
SMIM17P0DL12 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SMIM17P0DL12 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM17P0DL12 AC004911.1-201ENST00000416316 871 ntBASIC13.68□□□□□ -0.22
SMIM17P0DL12 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM17P0DL12 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.68□□□□□ -0.22
SMIM17P0DL12 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.68□□□□□ -0.22
SMIM17P0DL12 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM17P0DL12 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SMIM17P0DL12 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.68□□□□□ -0.22
SMIM17P0DL12 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.68□□□□□ -0.22
SMIM17P0DL12 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.68□□□□□ -0.22
SMIM17P0DL12 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM17P0DL12 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SMIM17P0DL12 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.68□□□□□ -0.22
SMIM17P0DL12 AC073592.3-201ENST00000625118 1834 ntBASIC13.68□□□□□ -0.22
SMIM17P0DL12 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM17P0DL12 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM17P0DL12 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM17P0DL12 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.68□□□□□ -0.22
SMIM17P0DL12 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SMIM17P0DL12 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM17P0DL12 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SMIM17P0DL12 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.68□□□□□ -0.22
SMIM17P0DL12 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM17P0DL12 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SMIM17P0DL12 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM17P0DL12 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM17P0DL12 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM17P0DL12 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM17P0DL12 SIRPAP1-201ENST00000448467 1770 ntBASIC13.68□□□□□ -0.22
SMIM17P0DL12 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SMIM17P0DL12 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SMIM17P0DL12 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM17P0DL12 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM17P0DL12 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SMIM17P0DL12 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM17P0DL12 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM17P0DL12 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM17P0DL12 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM17P0DL12 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM17P0DL12 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM17P0DL12 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM17P0DL12 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM17P0DL12 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM17P0DL12 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM17P0DL12 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM17P0DL12 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM17P0DL12 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM17P0DL12 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 AC080038.1-201ENST00000611274 1154 ntBASIC13.67□□□□□ -0.22
SMIM17P0DL12 MIR5787-201ENST00000611784 55 ntBASIC13.67□□□□□ -0.22
SMIM17P0DL12 AL121829.2-201ENST00000620908 328 ntBASIC13.67□□□□□ -0.22
SMIM17P0DL12 MYC-208ENST00000641036 567 ntBASIC13.67□□□□□ -0.22
SMIM17P0DL12 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM17P0DL12 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
SMIM17P0DL12 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM17P0DL12 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM17P0DL12 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM17P0DL12 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM17P0DL12 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM17P0DL12 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM17P0DL12 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SMIM17P0DL12 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM17P0DL12 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SMIM17P0DL12 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC13.66□□□□□ -0.22
SMIM17P0DL12 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM17P0DL12 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM17P0DL12 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM17P0DL12 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.66□□□□□ -0.22
SMIM17P0DL12 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM17P0DL12 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SMIM17P0DL12 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM17P0DL12 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms