Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.26■□□□□ 0.03
CTSDP07339 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTSDP07339 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSDP07339 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.26■□□□□ 0.03
CTSDP07339 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CTSDP07339 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
CTSDP07339 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSDP07339 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTSDP07339 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.26■□□□□ 0.03
CTSDP07339 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSDP07339 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.26■□□□□ 0.03
CTSDP07339 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSDP07339 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CTSDP07339 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSDP07339 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.25■□□□□ 0.03
CTSDP07339 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CTSDP07339 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.25■□□□□ 0.03
CTSDP07339 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.25■□□□□ 0.03
CTSDP07339 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CTSDP07339 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.25■□□□□ 0.03
CTSDP07339 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CTSDP07339 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CTSDP07339 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.25■□□□□ 0.03
CTSDP07339 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.25■□□□□ 0.03
CTSDP07339 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 ID1-201ENST00000376105 1233 ntBASIC15.25■□□□□ 0.03
CTSDP07339 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CTSDP07339 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC15.25■□□□□ 0.03
CTSDP07339 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.25■□□□□ 0.03
CTSDP07339 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.25■□□□□ 0.03
CTSDP07339 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.25■□□□□ 0.03
CTSDP07339 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
CTSDP07339 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.25■□□□□ 0.03
CTSDP07339 PHGDH-209ENST00000641074 1780 ntBASIC15.25■□□□□ 0.03
CTSDP07339 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
CTSDP07339 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTSDP07339 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CTSDP07339 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.24■□□□□ 0.03
CTSDP07339 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CTSDP07339 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTSDP07339 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTSDP07339 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.24■□□□□ 0.03
CTSDP07339 AC080080.1-201ENST00000625121 2420 ntBASIC15.24■□□□□ 0.03
CTSDP07339 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTSDP07339 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CTSDP07339 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.24■□□□□ 0.03
CTSDP07339 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.24■□□□□ 0.03
CTSDP07339 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTSDP07339 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTSDP07339 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.24■□□□□ 0.03
CTSDP07339 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.24■□□□□ 0.03
CTSDP07339 AL355802.2-201ENST00000402069 882 ntBASIC15.24■□□□□ 0.03
CTSDP07339 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.24■□□□□ 0.03
CTSDP07339 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CTSDP07339 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.03
CTSDP07339 UNC93B4-201ENST00000505679 747 ntBASIC15.24■□□□□ 0.03
CTSDP07339 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTSDP07339 AL138781.1-201ENST00000566567 1274 ntBASIC15.24■□□□□ 0.03
CTSDP07339 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CTSDP07339 AC083880.1-201ENST00000608266 535 ntBASIC15.24■□□□□ 0.03
CTSDP07339 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.24■□□□□ 0.03
CTSDP07339 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTSDP07339 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CTSDP07339 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTSDP07339 AL109659.2-201ENST00000606809 1674 ntBASIC15.24■□□□□ 0.03
CTSDP07339 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTSDP07339 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTSDP07339 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTSDP07339 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTSDP07339 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CTSDP07339 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.24■□□□□ 0.03
CTSDP07339 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CTSDP07339 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTSDP07339 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSDP07339 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSDP07339 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CTSDP07339 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CTSDP07339 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSDP07339 AC141586.5-201ENST00000624546 2050 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms