Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGN1P05114 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.65■□□□□ 0.26
HMGN1P05114 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.65■□□□□ 0.26
HMGN1P05114 AC130371.2-201ENST00000619443 611 ntBASIC16.65■□□□□ 0.26
HMGN1P05114 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.65■□□□□ 0.26
HMGN1P05114 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGN1P05114 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGN1P05114 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HMGN1P05114 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGN1P05114 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGN1P05114 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.65■□□□□ 0.26
HMGN1P05114 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGN1P05114 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGN1P05114 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HMGN1P05114 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGN1P05114 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGN1P05114 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.65■□□□□ 0.26
HMGN1P05114 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGN1P05114 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGN1P05114 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HMGN1P05114 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGN1P05114 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HMGN1P05114 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGN1P05114 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGN1P05114 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HMGN1P05114 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.64■□□□□ 0.25
HMGN1P05114 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGN1P05114 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.64■□□□□ 0.25
HMGN1P05114 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HMGN1P05114 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.64■□□□□ 0.25
HMGN1P05114 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMGN1P05114 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMGN1P05114 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGN1P05114 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HMGN1P05114 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMGN1P05114 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGN1P05114 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.64■□□□□ 0.25
HMGN1P05114 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.64■□□□□ 0.25
HMGN1P05114 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.64■□□□□ 0.25
HMGN1P05114 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.64■□□□□ 0.25
HMGN1P05114 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
HMGN1P05114 RN7SL471P-201ENST00000580476 299 ntBASIC16.64■□□□□ 0.25
HMGN1P05114 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMGN1P05114 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.64■□□□□ 0.25
HMGN1P05114 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.64■□□□□ 0.25
HMGN1P05114 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGN1P05114 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGN1P05114 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.64■□□□□ 0.25
HMGN1P05114 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.64■□□□□ 0.25
HMGN1P05114 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.64■□□□□ 0.25
HMGN1P05114 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMGN1P05114 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGN1P05114 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGN1P05114 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.64■□□□□ 0.25
HMGN1P05114 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
HMGN1P05114 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.64■□□□□ 0.25
HMGN1P05114 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMGN1P05114 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMGN1P05114 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGN1P05114 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
HMGN1P05114 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGN1P05114 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.63■□□□□ 0.25
HMGN1P05114 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGN1P05114 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.63■□□□□ 0.25
HMGN1P05114 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGN1P05114 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HMGN1P05114 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGN1P05114 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.63■□□□□ 0.25
HMGN1P05114 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.63■□□□□ 0.25
HMGN1P05114 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGN1P05114 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HMGN1P05114 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGN1P05114 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HMGN1P05114 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.63■□□□□ 0.25
HMGN1P05114 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.63■□□□□ 0.25
HMGN1P05114 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HMGN1P05114 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.63■□□□□ 0.25
HMGN1P05114 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.63■□□□□ 0.25
HMGN1P05114 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGN1P05114 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.63■□□□□ 0.25
HMGN1P05114 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HMGN1P05114 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGN1P05114 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HMGN1P05114 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGN1P05114 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HMGN1P05114 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGN1P05114 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMGN1P05114 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMGN1P05114 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGN1P05114 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGN1P05114 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGN1P05114 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMGN1P05114 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGN1P05114 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HMGN1P05114 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMGN1P05114 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGN1P05114 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMGN1P05114 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMGN1P05114 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGN1P05114 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms