Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCATP04180 AC010653.2-201ENST00000623505 997 ntBASIC16.07■□□□□ 0.16
LCATP04180 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCATP04180 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LCATP04180 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCATP04180 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.07■□□□□ 0.16
LCATP04180 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.07■□□□□ 0.16
LCATP04180 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCATP04180 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCATP04180 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.07■□□□□ 0.16
LCATP04180 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.07■□□□□ 0.16
LCATP04180 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LCATP04180 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCATP04180 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LCATP04180 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
LCATP04180 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.06■□□□□ 0.16
LCATP04180 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.06■□□□□ 0.16
LCATP04180 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCATP04180 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCATP04180 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LCATP04180 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.06■□□□□ 0.16
LCATP04180 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCATP04180 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.06■□□□□ 0.16
LCATP04180 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCATP04180 KRT8P50-201ENST00000562022 1438 ntBASIC16.06■□□□□ 0.16
LCATP04180 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCATP04180 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCATP04180 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.06■□□□□ 0.16
LCATP04180 KRT18P23-201ENST00000435622 1283 ntBASIC16.06■□□□□ 0.16
LCATP04180 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.06■□□□□ 0.16
LCATP04180 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.06■□□□□ 0.16
LCATP04180 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCATP04180 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.06■□□□□ 0.16
LCATP04180 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.06■□□□□ 0.16
LCATP04180 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.06■□□□□ 0.16
LCATP04180 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.06■□□□□ 0.16
LCATP04180 AC010947.1-201ENST00000623454 693 ntBASIC16.06■□□□□ 0.16
LCATP04180 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.06■□□□□ 0.16
LCATP04180 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LCATP04180 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LCATP04180 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCATP04180 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LCATP04180 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCATP04180 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCATP04180 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCATP04180 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LCATP04180 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.05■□□□□ 0.16
LCATP04180 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCATP04180 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LCATP04180 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCATP04180 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.05■□□□□ 0.16
LCATP04180 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCATP04180 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCATP04180 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCATP04180 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.05■□□□□ 0.16
LCATP04180 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.05■□□□□ 0.16
LCATP04180 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCATP04180 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCATP04180 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LCATP04180 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCATP04180 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCATP04180 WWOX-216ENST00000569818 525 ntBASIC16.05■□□□□ 0.16
LCATP04180 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.05■□□□□ 0.16
LCATP04180 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCATP04180 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCATP04180 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCATP04180 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.05■□□□□ 0.16
LCATP04180 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.05■□□□□ 0.16
LCATP04180 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCATP04180 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.05■□□□□ 0.16
LCATP04180 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCATP04180 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCATP04180 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCATP04180 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.04■□□□□ 0.16
LCATP04180 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCATP04180 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.04■□□□□ 0.16
LCATP04180 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.04■□□□□ 0.16
LCATP04180 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.04■□□□□ 0.16
LCATP04180 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCATP04180 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
LCATP04180 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCATP04180 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCATP04180 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.04■□□□□ 0.16
LCATP04180 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCATP04180 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCATP04180 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCATP04180 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCATP04180 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCATP04180 INGX-201ENST00000359239 846 ntBASIC16.04■□□□□ 0.16
LCATP04180 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LCATP04180 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.04■□□□□ 0.16
LCATP04180 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCATP04180 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.04■□□□□ 0.16
LCATP04180 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.04■□□□□ 0.16
LCATP04180 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.04■□□□□ 0.16
LCATP04180 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCATP04180 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.04■□□□□ 0.16
LCATP04180 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
LCATP04180 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCATP04180 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms