Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 PARL-206ENST00000435888 1098 ntTSL 5 BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.82□□□□□ -0.2
HLA-DQA1P01909 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 AL499627.1-201ENST00000569373 2188 ntBASIC13.82□□□□□ -0.2
HLA-DQA1P01909 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HLA-DQA1P01909 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQA1P01909 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HLA-DQA1P01909 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DQA1P01909 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DQA1P01909 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.8□□□□□ -0.2
HLA-DQA1P01909 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DQA1P01909 AL356309.3-201ENST00000624132 1934 ntBASIC13.8□□□□□ -0.2
HLA-DQA1P01909 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQA1P01909 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQA1P01909 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQA1P01909 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQA1P01909 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQA1P01909 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQA1P01909 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.8□□□□□ -0.2
HLA-DQA1P01909 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQA1P01909 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.8□□□□□ -0.2
HLA-DQA1P01909 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DQA1P01909 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQA1P01909 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQA1P01909 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQA1P01909 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC13.8□□□□□ -0.2
HLA-DQA1P01909 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQA1P01909 MCRIP2P1-201ENST00000394346 511 ntBASIC13.8□□□□□ -0.2
HLA-DQA1P01909 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms