Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TIMP1P01033 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TIMP1P01033 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TIMP1P01033 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TIMP1P01033 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TIMP1P01033 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.77■□□□□ 0.76
TIMP1P01033 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TIMP1P01033 PKD1P6-201ENST00000343738 4769 ntBASIC19.77■□□□□ 0.76
TIMP1P01033 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.77■□□□□ 0.76
TIMP1P01033 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TIMP1P01033 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.77■□□□□ 0.76
TIMP1P01033 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TIMP1P01033 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TIMP1P01033 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TIMP1P01033 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TIMP1P01033 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.77■□□□□ 0.76
TIMP1P01033 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.77■□□□□ 0.76
TIMP1P01033 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.77■□□□□ 0.76
TIMP1P01033 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.77■□□□□ 0.76
TIMP1P01033 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.77■□□□□ 0.76
TIMP1P01033 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TIMP1P01033 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TIMP1P01033 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
TIMP1P01033 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TIMP1P01033 SDHAP2-201ENST00000455183 2001 ntBASIC19.76■□□□□ 0.75
TIMP1P01033 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TIMP1P01033 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TIMP1P01033 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TIMP1P01033 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TIMP1P01033 LINC00602-201ENST00000629776 2065 ntBASIC19.76■□□□□ 0.75
TIMP1P01033 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TIMP1P01033 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TIMP1P01033 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.76■□□□□ 0.75
TIMP1P01033 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TIMP1P01033 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TIMP1P01033 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TIMP1P01033 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.76■□□□□ 0.75
TIMP1P01033 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TIMP1P01033 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TIMP1P01033 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TIMP1P01033 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TIMP1P01033 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.76■□□□□ 0.75
TIMP1P01033 AL596442.2-201ENST00000610240 980 ntBASIC19.76■□□□□ 0.75
TIMP1P01033 AP000867.4-201ENST00000641616 219 ntBASIC19.76■□□□□ 0.75
TIMP1P01033 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.76■□□□□ 0.75
TIMP1P01033 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TIMP1P01033 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.76■□□□□ 0.75
TIMP1P01033 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TIMP1P01033 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TIMP1P01033 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TIMP1P01033 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TIMP1P01033 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.75■□□□□ 0.75
TIMP1P01033 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TIMP1P01033 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TIMP1P01033 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.75■□□□□ 0.75
TIMP1P01033 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.75■□□□□ 0.75
TIMP1P01033 METTL21AP1-201ENST00000438852 635 ntBASIC19.75■□□□□ 0.75
TIMP1P01033 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.75■□□□□ 0.75
TIMP1P01033 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.75■□□□□ 0.75
TIMP1P01033 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.75■□□□□ 0.75
TIMP1P01033 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.75■□□□□ 0.75
TIMP1P01033 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
TIMP1P01033 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.75■□□□□ 0.75
TIMP1P01033 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.75■□□□□ 0.75
TIMP1P01033 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.75■□□□□ 0.75
TIMP1P01033 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TIMP1P01033 AC125437.2-201ENST00000625180 2167 ntBASIC19.75■□□□□ 0.75
TIMP1P01033 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TIMP1P01033 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TIMP1P01033 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TIMP1P01033 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TIMP1P01033 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TIMP1P01033 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TIMP1P01033 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.74■□□□□ 0.75
TIMP1P01033 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TIMP1P01033 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TIMP1P01033 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TIMP1P01033 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TIMP1P01033 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TIMP1P01033 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.74■□□□□ 0.75
TIMP1P01033 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TIMP1P01033 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TIMP1P01033 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TIMP1P01033 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.74■□□□□ 0.75
TIMP1P01033 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.74■□□□□ 0.75
TIMP1P01033 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TIMP1P01033 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.74■□□□□ 0.75
TIMP1P01033 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.74■□□□□ 0.75
TIMP1P01033 AC064836.3-201ENST00000607928 673 ntBASIC19.74■□□□□ 0.75
TIMP1P01033 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.74■□□□□ 0.75
TIMP1P01033 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TIMP1P01033 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TIMP1P01033 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TIMP1P01033 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.74■□□□□ 0.75
TIMP1P01033 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TIMP1P01033 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.74■□□□□ 0.75
TIMP1P01033 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TIMP1P01033 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TIMP1P01033 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.74■□□□□ 0.75
TIMP1P01033 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms