Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN1O95832 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN1O95832 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN1O95832 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN1O95832 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN1O95832 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN1O95832 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN1O95832 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN1O95832 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN1O95832 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN1O95832 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.37■□□□□ 0.21
CLDN1O95832 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN1O95832 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN1O95832 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN1O95832 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CLDN1O95832 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN1O95832 AP005901.3-202ENST00000581653 237 ntBASIC16.37■□□□□ 0.21
CLDN1O95832 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.37■□□□□ 0.21
CLDN1O95832 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN1O95832 AL592071.1-201ENST00000611956 408 ntBASIC16.37■□□□□ 0.21
CLDN1O95832 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.37■□□□□ 0.21
CLDN1O95832 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN1O95832 AC124864.1-201ENST00000623408 392 ntBASIC16.37■□□□□ 0.21
CLDN1O95832 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CLDN1O95832 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN1O95832 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN1O95832 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN1O95832 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CLDN1O95832 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CLDN1O95832 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN1O95832 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN1O95832 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN1O95832 ZNF259P1-201ENST00000407656 1365 ntBASIC16.37■□□□□ 0.21
CLDN1O95832 AC018445.3-201ENST00000624177 1945 ntBASIC16.37■□□□□ 0.21
CLDN1O95832 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CLDN1O95832 AL020996.1-203ENST00000536896 2307 ntBASIC16.36■□□□□ 0.21
CLDN1O95832 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN1O95832 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN1O95832 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN1O95832 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CLDN1O95832 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN1O95832 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN1O95832 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN1O95832 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN1O95832 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.36■□□□□ 0.21
CLDN1O95832 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN1O95832 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN1O95832 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN1O95832 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN1O95832 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CLDN1O95832 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.36■□□□□ 0.21
CLDN1O95832 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN1O95832 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN1O95832 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.36■□□□□ 0.21
CLDN1O95832 MIR7706-201ENST00000613747 67 ntBASIC16.36■□□□□ 0.21
CLDN1O95832 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.36■□□□□ 0.21
CLDN1O95832 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CLDN1O95832 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CLDN1O95832 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN1O95832 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN1O95832 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN1O95832 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN1O95832 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN1O95832 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CLDN1O95832 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CLDN1O95832 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN1O95832 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CLDN1O95832 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CLDN1O95832 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 AC091607.1-201ENST00000490318 1060 ntBASIC16.35■□□□□ 0.21
CLDN1O95832 PGAM5P1-201ENST00000518923 814 ntBASIC16.35■□□□□ 0.21
CLDN1O95832 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.35■□□□□ 0.21
CLDN1O95832 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.35■□□□□ 0.21
CLDN1O95832 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.35■□□□□ 0.21
CLDN1O95832 AC139887.3-201ENST00000568585 713 ntBASIC16.35■□□□□ 0.21
CLDN1O95832 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.35■□□□□ 0.21
CLDN1O95832 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CLDN1O95832 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN1O95832 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.35■□□□□ 0.21
CLDN1O95832 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CLDN1O95832 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CLDN1O95832 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN1O95832 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.35■□□□□ 0.21
CLDN1O95832 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms