Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.68■□□□□ 0.74
CSPG5O95196 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.68■□□□□ 0.74
CSPG5O95196 AL773604.1-201ENST00000617417 272 ntBASIC19.68■□□□□ 0.74
CSPG5O95196 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSPG5O95196 AC034236.2-201ENST00000606662 1610 ntBASIC19.68■□□□□ 0.74
CSPG5O95196 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
CSPG5O95196 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CSPG5O95196 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSPG5O95196 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
CSPG5O95196 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSPG5O95196 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CSPG5O95196 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSPG5O95196 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CSPG5O95196 AL353692.3-201ENST00000407031 1396 ntBASIC19.68■□□□□ 0.74
CSPG5O95196 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSPG5O95196 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CSPG5O95196 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.67■□□□□ 0.74
CSPG5O95196 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CSPG5O95196 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CSPG5O95196 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSPG5O95196 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.67■□□□□ 0.74
CSPG5O95196 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CSPG5O95196 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CSPG5O95196 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.67■□□□□ 0.74
CSPG5O95196 AC011840.4-201ENST00000578471 627 ntBASIC19.67■□□□□ 0.74
CSPG5O95196 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.67■□□□□ 0.74
CSPG5O95196 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CSPG5O95196 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSPG5O95196 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSPG5O95196 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CSPG5O95196 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CSPG5O95196 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CSPG5O95196 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSPG5O95196 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSPG5O95196 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CSPG5O95196 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSPG5O95196 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSPG5O95196 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSPG5O95196 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.66■□□□□ 0.74
CSPG5O95196 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSPG5O95196 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSPG5O95196 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSPG5O95196 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CSPG5O95196 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CSPG5O95196 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.66■□□□□ 0.74
CSPG5O95196 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSPG5O95196 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSPG5O95196 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSPG5O95196 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.66■□□□□ 0.74
CSPG5O95196 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSPG5O95196 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.66■□□□□ 0.74
CSPG5O95196 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.66■□□□□ 0.74
CSPG5O95196 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.66■□□□□ 0.74
CSPG5O95196 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSPG5O95196 IRX1P1-201ENST00000438849 1838 ntBASIC19.66■□□□□ 0.74
CSPG5O95196 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSPG5O95196 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSPG5O95196 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CSPG5O95196 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSPG5O95196 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSPG5O95196 KRT8P7-201ENST00000533003 1432 ntBASIC19.66■□□□□ 0.74
CSPG5O95196 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSPG5O95196 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSPG5O95196 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSPG5O95196 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSPG5O95196 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSPG5O95196 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSPG5O95196 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.65■□□□□ 0.74
CSPG5O95196 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSPG5O95196 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.65■□□□□ 0.74
CSPG5O95196 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.65■□□□□ 0.74
CSPG5O95196 MIR1233-2-201ENST00000408138 82 ntBASIC19.65■□□□□ 0.74
CSPG5O95196 MIR1233-1-201ENST00000408722 82 ntBASIC19.65■□□□□ 0.74
CSPG5O95196 AL031284.1-201ENST00000419297 478 ntBASIC19.65■□□□□ 0.74
CSPG5O95196 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CSPG5O95196 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.65■□□□□ 0.74
CSPG5O95196 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.65■□□□□ 0.74
CSPG5O95196 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSPG5O95196 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.65■□□□□ 0.74
CSPG5O95196 AL049840.3-201ENST00000602669 611 ntBASIC19.65■□□□□ 0.74
CSPG5O95196 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CSPG5O95196 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.65■□□□□ 0.74
CSPG5O95196 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CSPG5O95196 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CSPG5O95196 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSPG5O95196 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSPG5O95196 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSPG5O95196 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.65■□□□□ 0.74
CSPG5O95196 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSPG5O95196 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSPG5O95196 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSPG5O95196 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CSPG5O95196 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CSPG5O95196 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
CSPG5O95196 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CSPG5O95196 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CSPG5O95196 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CSPG5O95196 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSPG5O95196 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSPG5O95196 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms