Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.32■□□□□ 0.84
CLSTN1O94985 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CLSTN1O94985 RCC2P3-201ENST00000418112 1537 ntBASIC20.32■□□□□ 0.84
CLSTN1O94985 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLSTN1O94985 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CLSTN1O94985 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLSTN1O94985 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLSTN1O94985 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLSTN1O94985 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLSTN1O94985 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLSTN1O94985 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLSTN1O94985 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CLSTN1O94985 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLSTN1O94985 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLSTN1O94985 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLSTN1O94985 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLSTN1O94985 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLSTN1O94985 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLSTN1O94985 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC20.31■□□□□ 0.84
CLSTN1O94985 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLSTN1O94985 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLSTN1O94985 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.31■□□□□ 0.84
CLSTN1O94985 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLSTN1O94985 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLSTN1O94985 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.31■□□□□ 0.84
CLSTN1O94985 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.31■□□□□ 0.84
CLSTN1O94985 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.31■□□□□ 0.84
CLSTN1O94985 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.31■□□□□ 0.84
CLSTN1O94985 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.31■□□□□ 0.84
CLSTN1O94985 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.31■□□□□ 0.84
CLSTN1O94985 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.31■□□□□ 0.84
CLSTN1O94985 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLSTN1O94985 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CLSTN1O94985 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.31■□□□□ 0.84
CLSTN1O94985 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLSTN1O94985 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLSTN1O94985 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
CLSTN1O94985 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLSTN1O94985 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.31■□□□□ 0.84
CLSTN1O94985 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLSTN1O94985 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLSTN1O94985 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.31■□□□□ 0.84
CLSTN1O94985 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLSTN1O94985 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.31■□□□□ 0.84
CLSTN1O94985 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLSTN1O94985 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLSTN1O94985 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLSTN1O94985 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLSTN1O94985 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLSTN1O94985 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
CLSTN1O94985 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLSTN1O94985 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLSTN1O94985 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLSTN1O94985 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLSTN1O94985 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
CLSTN1O94985 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.3■□□□□ 0.84
CLSTN1O94985 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLSTN1O94985 SLC25A1P2-201ENST00000430693 912 ntBASIC20.3■□□□□ 0.84
CLSTN1O94985 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLSTN1O94985 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLSTN1O94985 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.3■□□□□ 0.84
CLSTN1O94985 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.3■□□□□ 0.84
CLSTN1O94985 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLSTN1O94985 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLSTN1O94985 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLSTN1O94985 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLSTN1O94985 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLSTN1O94985 AC006333.2-201ENST00000607957 2099 ntBASIC20.3■□□□□ 0.84
CLSTN1O94985 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLSTN1O94985 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLSTN1O94985 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLSTN1O94985 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLSTN1O94985 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLSTN1O94985 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.29■□□□□ 0.84
CLSTN1O94985 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLSTN1O94985 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.29■□□□□ 0.84
CLSTN1O94985 ECEL1P2-202ENST00000465689 757 ntBASIC20.29■□□□□ 0.84
CLSTN1O94985 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLSTN1O94985 AC010947.1-201ENST00000623454 693 ntBASIC20.29■□□□□ 0.84
CLSTN1O94985 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLSTN1O94985 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLSTN1O94985 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLSTN1O94985 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLSTN1O94985 AC009113.1-201ENST00000570267 2443 ntBASIC20.28■□□□□ 0.84
CLSTN1O94985 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLSTN1O94985 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CLSTN1O94985 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLSTN1O94985 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.28■□□□□ 0.84
CLSTN1O94985 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.28■□□□□ 0.84
CLSTN1O94985 MCCD1P1-208ENST00000445732 328 ntBASIC20.28■□□□□ 0.84
CLSTN1O94985 TSPY17P-201ENST00000450329 467 ntBASIC20.28■□□□□ 0.84
CLSTN1O94985 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CLSTN1O94985 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.28■□□□□ 0.84
CLSTN1O94985 AP003041.3-201ENST00000527151 707 ntBASIC20.28■□□□□ 0.84
CLSTN1O94985 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.28■□□□□ 0.84
CLSTN1O94985 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
CLSTN1O94985 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.28■□□□□ 0.84
CLSTN1O94985 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
CLSTN1O94985 AC093525.10-201ENST00000625130 1569 ntBASIC20.28■□□□□ 0.84
CLSTN1O94985 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms