Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.41■□□□□ 0.54
GPC4O75487 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
GPC4O75487 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.41■□□□□ 0.54
GPC4O75487 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GPC4O75487 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.41■□□□□ 0.54
GPC4O75487 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
GPC4O75487 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.41■□□□□ 0.54
GPC4O75487 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.41■□□□□ 0.54
GPC4O75487 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GPC4O75487 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
GPC4O75487 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.41■□□□□ 0.54
GPC4O75487 AC073912.3-201ENST00000624414 853 ntBASIC18.41■□□□□ 0.54
GPC4O75487 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.41■□□□□ 0.54
GPC4O75487 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GPC4O75487 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GPC4O75487 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.41■□□□□ 0.54
GPC4O75487 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
GPC4O75487 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GPC4O75487 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GPC4O75487 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GPC4O75487 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GPC4O75487 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GPC4O75487 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
GPC4O75487 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GPC4O75487 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.4■□□□□ 0.54
GPC4O75487 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
GPC4O75487 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GPC4O75487 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GPC4O75487 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.4■□□□□ 0.54
GPC4O75487 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GPC4O75487 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GPC4O75487 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.4■□□□□ 0.54
GPC4O75487 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GPC4O75487 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GPC4O75487 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.4■□□□□ 0.54
GPC4O75487 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GPC4O75487 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
GPC4O75487 NOC2LP1-202ENST00000452600 2235 ntBASIC18.39■□□□□ 0.54
GPC4O75487 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.39■□□□□ 0.53
GPC4O75487 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
GPC4O75487 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.39■□□□□ 0.53
GPC4O75487 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.39■□□□□ 0.53
GPC4O75487 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.39■□□□□ 0.53
GPC4O75487 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
GPC4O75487 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GPC4O75487 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GPC4O75487 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GPC4O75487 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.39■□□□□ 0.53
GPC4O75487 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.39■□□□□ 0.53
GPC4O75487 AC128688.1-201ENST00000487626 519 ntBASIC18.39■□□□□ 0.53
GPC4O75487 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.39■□□□□ 0.53
GPC4O75487 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.39■□□□□ 0.53
GPC4O75487 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GPC4O75487 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
GPC4O75487 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
GPC4O75487 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GPC4O75487 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
GPC4O75487 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
GPC4O75487 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GPC4O75487 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GPC4O75487 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GPC4O75487 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
GPC4O75487 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GPC4O75487 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GPC4O75487 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GPC4O75487 AC008556.1-201ENST00000610908 2040 ntBASIC18.39■□□□□ 0.53
GPC4O75487 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.38■□□□□ 0.53
GPC4O75487 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GPC4O75487 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GPC4O75487 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.38■□□□□ 0.53
GPC4O75487 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GPC4O75487 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GPC4O75487 MCCD1P1-208ENST00000445732 328 ntBASIC18.38■□□□□ 0.53
GPC4O75487 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GPC4O75487 AC145285.6-201ENST00000604632 637 ntBASIC18.38■□□□□ 0.53
GPC4O75487 AC012306.2-201ENST00000609350 630 ntBASIC18.38■□□□□ 0.53
GPC4O75487 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GPC4O75487 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GPC4O75487 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GPC4O75487 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
GPC4O75487 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GPC4O75487 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.38■□□□□ 0.53
GPC4O75487 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GPC4O75487 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC4O75487 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC4O75487 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GPC4O75487 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
GPC4O75487 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.37■□□□□ 0.53
GPC4O75487 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GPC4O75487 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
GPC4O75487 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.37■□□□□ 0.53
GPC4O75487 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC4O75487 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GPC4O75487 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GPC4O75487 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC4O75487 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.37■□□□□ 0.53
GPC4O75487 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC4O75487 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.37■□□□□ 0.53
GPC4O75487 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC4O75487 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms