Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
PMPCBO75439 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PMPCBO75439 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PMPCBO75439 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.65■□□□□ 0.58
PMPCBO75439 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.65■□□□□ 0.58
PMPCBO75439 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PMPCBO75439 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.65■□□□□ 0.58
PMPCBO75439 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PMPCBO75439 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 AL137013.1-201ENST00000432946 1228 ntBASIC18.65■□□□□ 0.58
PMPCBO75439 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 SEC1P-202ENST00000473944 940 ntBASIC18.65■□□□□ 0.58
PMPCBO75439 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.65■□□□□ 0.58
PMPCBO75439 NEK4P2-201ENST00000580004 1012 ntBASIC18.65■□□□□ 0.58
PMPCBO75439 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.65■□□□□ 0.58
PMPCBO75439 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PMPCBO75439 AC010240.3-201ENST00000607688 395 ntBASIC18.65■□□□□ 0.58
PMPCBO75439 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.65■□□□□ 0.58
PMPCBO75439 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 ESPNP-201ENST00000270691 2015 ntBASIC18.65■□□□□ 0.58
PMPCBO75439 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PMPCBO75439 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PMPCBO75439 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PMPCBO75439 AC009102.3-201ENST00000623118 1491 ntBASIC18.65■□□□□ 0.58
PMPCBO75439 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PMPCBO75439 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PMPCBO75439 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.64■□□□□ 0.58
PMPCBO75439 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
PMPCBO75439 SDHAP2-201ENST00000455183 2001 ntBASIC18.64■□□□□ 0.58
PMPCBO75439 AL390961.4-201ENST00000623958 2535 ntBASIC18.64■□□□□ 0.57
PMPCBO75439 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.64■□□□□ 0.57
PMPCBO75439 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
PMPCBO75439 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PMPCBO75439 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.64■□□□□ 0.57
PMPCBO75439 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PMPCBO75439 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PMPCBO75439 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PMPCBO75439 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PMPCBO75439 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PMPCBO75439 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PMPCBO75439 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PMPCBO75439 AC113347.1-201ENST00000413321 391 ntBASIC18.64■□□□□ 0.57
PMPCBO75439 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PMPCBO75439 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PMPCBO75439 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PMPCBO75439 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.64■□□□□ 0.57
PMPCBO75439 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.64■□□□□ 0.57
PMPCBO75439 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.64■□□□□ 0.57
PMPCBO75439 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.64■□□□□ 0.57
PMPCBO75439 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PMPCBO75439 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PMPCBO75439 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PMPCBO75439 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PMPCBO75439 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.64■□□□□ 0.57
PMPCBO75439 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PMPCBO75439 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PMPCBO75439 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PMPCBO75439 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PMPCBO75439 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PMPCBO75439 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PMPCBO75439 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
PMPCBO75439 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PMPCBO75439 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PMPCBO75439 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PMPCBO75439 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.64■□□□□ 0.57
PMPCBO75439 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PMPCBO75439 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.64■□□□□ 0.57
PMPCBO75439 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.64■□□□□ 0.57
PMPCBO75439 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PMPCBO75439 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PMPCBO75439 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PMPCBO75439 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PMPCBO75439 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PMPCBO75439 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PMPCBO75439 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PMPCBO75439 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PMPCBO75439 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PMPCBO75439 TERF1P1-201ENST00000311003 1181 ntBASIC18.63■□□□□ 0.57
PMPCBO75439 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.63■□□□□ 0.57
PMPCBO75439 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms