Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF40O75150 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF40O75150 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF40O75150 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
RNF40O75150 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF40O75150 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RNF40O75150 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF40O75150 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF40O75150 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF40O75150 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF40O75150 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF40O75150 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.79■□□□□ 0.76
RNF40O75150 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF40O75150 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
RNF40O75150 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF40O75150 AC091390.4-202ENST00000476426 537 ntBASIC19.79■□□□□ 0.76
RNF40O75150 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF40O75150 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF40O75150 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF40O75150 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
RNF40O75150 AL138966.2-201ENST00000621997 464 ntBASIC19.79■□□□□ 0.76
RNF40O75150 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF40O75150 AL358472.4-201ENST00000633140 710 ntBASIC19.79■□□□□ 0.76
RNF40O75150 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF40O75150 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF40O75150 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF40O75150 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF40O75150 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF40O75150 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF40O75150 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF40O75150 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF40O75150 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF40O75150 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RNF40O75150 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF40O75150 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RNF40O75150 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF40O75150 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF40O75150 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF40O75150 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF40O75150 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF40O75150 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF40O75150 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF40O75150 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF40O75150 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF40O75150 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF40O75150 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF40O75150 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF40O75150 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RNF40O75150 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF40O75150 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
RNF40O75150 UPK3BP1-201ENST00000428678 509 ntBASIC19.78■□□□□ 0.76
RNF40O75150 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RNF40O75150 SLC25A1P2-201ENST00000430693 912 ntBASIC19.78■□□□□ 0.76
RNF40O75150 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF40O75150 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.78■□□□□ 0.76
RNF40O75150 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF40O75150 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF40O75150 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF40O75150 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF40O75150 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RNF40O75150 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF40O75150 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF40O75150 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF40O75150 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RNF40O75150 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF40O75150 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF40O75150 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF40O75150 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF40O75150 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
RNF40O75150 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF40O75150 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF40O75150 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF40O75150 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF40O75150 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
RNF40O75150 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF40O75150 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF40O75150 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF40O75150 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF40O75150 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF40O75150 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF40O75150 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF40O75150 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RNF40O75150 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.77■□□□□ 0.76
RNF40O75150 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.77■□□□□ 0.76
RNF40O75150 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF40O75150 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF40O75150 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF40O75150 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF40O75150 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF40O75150 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF40O75150 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF40O75150 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RNF40O75150 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RNF40O75150 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF40O75150 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.77■□□□□ 0.75
RNF40O75150 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.77■□□□□ 0.75
RNF40O75150 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RNF40O75150 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RNF40O75150 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.77■□□□□ 0.75
RNF40O75150 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms