Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 PVRIG2P-201ENST00000435460 978 ntBASIC18.75■□□□□ 0.59
SYNCRIPO60506 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SYNCRIPO60506 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.75■□□□□ 0.59
SYNCRIPO60506 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNCRIPO60506 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.75■□□□□ 0.59
SYNCRIPO60506 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SYNCRIPO60506 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.75■□□□□ 0.59
SYNCRIPO60506 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.75■□□□□ 0.59
SYNCRIPO60506 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNCRIPO60506 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.75■□□□□ 0.59
SYNCRIPO60506 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SYNCRIPO60506 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SYNCRIPO60506 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SYNCRIPO60506 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.74■□□□□ 0.59
SYNCRIPO60506 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SYNCRIPO60506 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SYNCRIPO60506 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNCRIPO60506 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SYNCRIPO60506 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.74■□□□□ 0.59
SYNCRIPO60506 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNCRIPO60506 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNCRIPO60506 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SYNCRIPO60506 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.74■□□□□ 0.59
SYNCRIPO60506 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.74■□□□□ 0.59
SYNCRIPO60506 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNCRIPO60506 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNCRIPO60506 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNCRIPO60506 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.74■□□□□ 0.59
SYNCRIPO60506 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNCRIPO60506 AP003733.1-201ENST00000491725 852 ntBASIC18.74■□□□□ 0.59
SYNCRIPO60506 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.74■□□□□ 0.59
SYNCRIPO60506 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.74■□□□□ 0.59
SYNCRIPO60506 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
SYNCRIPO60506 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.74■□□□□ 0.59
SYNCRIPO60506 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SYNCRIPO60506 AC068587.9-201ENST00000641814 219 ntBASIC18.74■□□□□ 0.59
SYNCRIPO60506 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNCRIPO60506 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SYNCRIPO60506 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNCRIPO60506 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNCRIPO60506 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNCRIPO60506 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.74■□□□□ 0.59
SYNCRIPO60506 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNCRIPO60506 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.74■□□□□ 0.59
SYNCRIPO60506 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SYNCRIPO60506 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.74■□□□□ 0.59
SYNCRIPO60506 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNCRIPO60506 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.74■□□□□ 0.59
SYNCRIPO60506 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNCRIPO60506 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNCRIPO60506 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SYNCRIPO60506 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SYNCRIPO60506 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SYNCRIPO60506 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.73■□□□□ 0.59
SYNCRIPO60506 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SYNCRIPO60506 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNCRIPO60506 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNCRIPO60506 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.73■□□□□ 0.59
SYNCRIPO60506 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.73■□□□□ 0.59
SYNCRIPO60506 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SYNCRIPO60506 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.73■□□□□ 0.59
SYNCRIPO60506 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SYNCRIPO60506 AP002383.4-201ENST00000442518 975 ntBASIC18.73■□□□□ 0.59
SYNCRIPO60506 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.73■□□□□ 0.59
SYNCRIPO60506 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.73■□□□□ 0.59
SYNCRIPO60506 MIR3180-1-201ENST00000580374 94 ntBASIC18.73■□□□□ 0.59
SYNCRIPO60506 MIR3180-3-201ENST00000584616 94 ntBASIC18.73■□□□□ 0.59
SYNCRIPO60506 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SYNCRIPO60506 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SYNCRIPO60506 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.73■□□□□ 0.59
SYNCRIPO60506 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
SYNCRIPO60506 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SYNCRIPO60506 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNCRIPO60506 Z83836.1-201ENST00000624605 1642 ntBASIC18.73■□□□□ 0.59
SYNCRIPO60506 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNCRIPO60506 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNCRIPO60506 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNCRIPO60506 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.73■□□□□ 0.59
SYNCRIPO60506 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SYNCRIPO60506 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.73■□□□□ 0.59
SYNCRIPO60506 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.73■□□□□ 0.59
SYNCRIPO60506 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SYNCRIPO60506 LETM1P2-201ENST00000597330 2178 ntBASIC18.72■□□□□ 0.59
SYNCRIPO60506 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.72■□□□□ 0.59
SYNCRIPO60506 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNCRIPO60506 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SYNCRIPO60506 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.72■□□□□ 0.59
SYNCRIPO60506 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNCRIPO60506 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.72■□□□□ 0.59
SYNCRIPO60506 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
SYNCRIPO60506 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.72■□□□□ 0.59
SYNCRIPO60506 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNCRIPO60506 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNCRIPO60506 RNF126P1-202ENST00000569893 925 ntBASIC18.72■□□□□ 0.59
SYNCRIPO60506 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.72■□□□□ 0.59
SYNCRIPO60506 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SYNCRIPO60506 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNCRIPO60506 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.72■□□□□ 0.59
SYNCRIPO60506 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNCRIPO60506 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms