Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.66■□□□□ 0.1
SSNA1O43805 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSNA1O43805 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSNA1O43805 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.66■□□□□ 0.1
SSNA1O43805 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSNA1O43805 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSNA1O43805 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSNA1O43805 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSNA1O43805 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSNA1O43805 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSNA1O43805 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSNA1O43805 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
SSNA1O43805 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SSNA1O43805 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SSNA1O43805 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SSNA1O43805 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SSNA1O43805 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
SSNA1O43805 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SSNA1O43805 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.65■□□□□ 0.1
SSNA1O43805 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.65■□□□□ 0.1
SSNA1O43805 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.65■□□□□ 0.1
SSNA1O43805 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.65■□□□□ 0.1
SSNA1O43805 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 AC131281.2-201ENST00000520478 145 ntBASIC15.65■□□□□ 0.1
SSNA1O43805 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC15.65■□□□□ 0.1
SSNA1O43805 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.65■□□□□ 0.1
SSNA1O43805 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.65■□□□□ 0.1
SSNA1O43805 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.65■□□□□ 0.1
SSNA1O43805 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
SSNA1O43805 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSNA1O43805 LINC00602-201ENST00000629776 2065 ntBASIC15.64■□□□□ 0.09
SSNA1O43805 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.64■□□□□ 0.09
SSNA1O43805 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSNA1O43805 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSNA1O43805 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SSNA1O43805 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSNA1O43805 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSNA1O43805 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSNA1O43805 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSNA1O43805 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSNA1O43805 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSNA1O43805 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSNA1O43805 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SSNA1O43805 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.64■□□□□ 0.09
SSNA1O43805 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SSNA1O43805 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSNA1O43805 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSNA1O43805 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC15.64■□□□□ 0.09
SSNA1O43805 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSNA1O43805 TSPY26P-202ENST00000565928 3884 ntBASIC15.64■□□□□ 0.09
SSNA1O43805 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSNA1O43805 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSNA1O43805 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.64■□□□□ 0.09
SSNA1O43805 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSNA1O43805 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSNA1O43805 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSNA1O43805 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSNA1O43805 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.64■□□□□ 0.09
SSNA1O43805 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
SSNA1O43805 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SSNA1O43805 HEIH-201ENST00000623091 1652 ntBASIC15.63■□□□□ 0.09
SSNA1O43805 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSNA1O43805 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SSNA1O43805 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSNA1O43805 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SSNA1O43805 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SSNA1O43805 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSNA1O43805 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
SSNA1O43805 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSNA1O43805 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.63■□□□□ 0.09
SSNA1O43805 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSNA1O43805 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSNA1O43805 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSNA1O43805 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.63■□□□□ 0.09
SSNA1O43805 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSNA1O43805 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSNA1O43805 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SSNA1O43805 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms