Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SMAD6O43541 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD6O43541 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.5■□□□□ 0.55
SMAD6O43541 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SMAD6O43541 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SMAD6O43541 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD6O43541 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD6O43541 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD6O43541 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD6O43541 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD6O43541 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SMAD6O43541 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.5■□□□□ 0.55
SMAD6O43541 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
SMAD6O43541 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.5■□□□□ 0.55
SMAD6O43541 AP002414.4-201ENST00000589764 1148 ntBASIC18.5■□□□□ 0.55
SMAD6O43541 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD6O43541 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SMAD6O43541 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SMAD6O43541 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD6O43541 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD6O43541 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD6O43541 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SMAD6O43541 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD6O43541 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD6O43541 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD6O43541 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD6O43541 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD6O43541 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD6O43541 ESPNP-201ENST00000270691 2015 ntBASIC18.49■□□□□ 0.55
SMAD6O43541 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.49■□□□□ 0.55
SMAD6O43541 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD6O43541 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.49■□□□□ 0.55
SMAD6O43541 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD6O43541 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SMAD6O43541 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD6O43541 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SMAD6O43541 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.49■□□□□ 0.55
SMAD6O43541 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.49■□□□□ 0.55
SMAD6O43541 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD6O43541 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.49■□□□□ 0.55
SMAD6O43541 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD6O43541 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.49■□□□□ 0.55
SMAD6O43541 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.49■□□□□ 0.55
SMAD6O43541 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.49■□□□□ 0.55
SMAD6O43541 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.49■□□□□ 0.55
SMAD6O43541 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.49■□□□□ 0.55
SMAD6O43541 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD6O43541 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD6O43541 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.49■□□□□ 0.55
SMAD6O43541 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD6O43541 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.49■□□□□ 0.55
SMAD6O43541 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD6O43541 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.49■□□□□ 0.55
SMAD6O43541 AL138781.2-201ENST00000617896 1843 ntBASIC18.49■□□□□ 0.55
SMAD6O43541 KRT18P1-202ENST00000452408 1331 ntBASIC18.49■□□□□ 0.55
SMAD6O43541 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMAD6O43541 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.48■□□□□ 0.55
SMAD6O43541 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMAD6O43541 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SMAD6O43541 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.48■□□□□ 0.55
SMAD6O43541 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMAD6O43541 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.48■□□□□ 0.55
SMAD6O43541 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMAD6O43541 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.48■□□□□ 0.55
SMAD6O43541 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMAD6O43541 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMAD6O43541 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.48■□□□□ 0.55
SMAD6O43541 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.48■□□□□ 0.55
SMAD6O43541 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SMAD6O43541 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.48■□□□□ 0.55
SMAD6O43541 AC092329.2-201ENST00000598402 547 ntBASIC18.48■□□□□ 0.55
SMAD6O43541 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
SMAD6O43541 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SMAD6O43541 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMAD6O43541 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SMAD6O43541 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMAD6O43541 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMAD6O43541 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMAD6O43541 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.48■□□□□ 0.55
SMAD6O43541 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
SMAD6O43541 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
SMAD6O43541 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
SMAD6O43541 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMAD6O43541 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMAD6O43541 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
SMAD6O43541 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMAD6O43541 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMAD6O43541 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.48■□□□□ 0.55
SMAD6O43541 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMAD6O43541 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMAD6O43541 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMAD6O43541 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.47■□□□□ 0.55
SMAD6O43541 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMAD6O43541 GMCL1P1-201ENST00000463439 1581 ntBASIC18.47■□□□□ 0.55
SMAD6O43541 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMAD6O43541 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.47■□□□□ 0.55
SMAD6O43541 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SMAD6O43541 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.47■□□□□ 0.55
SMAD6O43541 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMAD6O43541 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms