Protein–RNA interactions for Protein: O43248

HOXC11, Homeobox protein Hox-C11, humanhuman

Predicted RBP Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11O43248 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HOXC11O43248 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC11O43248 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXC11O43248 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXC11O43248 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXC11O43248 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXC11O43248 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC11O43248 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC11O43248 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXC11O43248 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC11O43248 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC11O43248 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC11O43248 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC11O43248 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC11O43248 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC11O43248 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXC11O43248 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC11O43248 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HOXC11O43248 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC11O43248 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXC11O43248 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC11O43248 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
HOXC11O43248 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC11O43248 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC11O43248 POM121L3P-201ENST00000419331 1163 ntBASIC18.65■□□□□ 0.58
HOXC11O43248 TSPY12P-201ENST00000421279 868 ntBASIC18.65■□□□□ 0.58
HOXC11O43248 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXC11O43248 MINOS1P3-201ENST00000457048 203 ntBASIC18.65■□□□□ 0.58
HOXC11O43248 AL160237.2-201ENST00000556165 472 ntBASIC18.65■□□□□ 0.58
HOXC11O43248 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC11O43248 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXC11O43248 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXC11O43248 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC11O43248 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXC11O43248 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC11O43248 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXC11O43248 AL499627.1-201ENST00000569373 2188 ntBASIC18.65■□□□□ 0.58
HOXC11O43248 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC11O43248 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXC11O43248 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXC11O43248 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
HOXC11O43248 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
HOXC11O43248 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
HOXC11O43248 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC11O43248 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC11O43248 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HOXC11O43248 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC11O43248 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC11O43248 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC11O43248 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC11O43248 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC11O43248 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC11O43248 NUS1P2-201ENST00000417358 873 ntBASIC18.64■□□□□ 0.57
HOXC11O43248 AC079781.3-201ENST00000449110 356 ntBASIC18.64■□□□□ 0.57
HOXC11O43248 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXC11O43248 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC11O43248 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.64■□□□□ 0.57
HOXC11O43248 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.64■□□□□ 0.57
HOXC11O43248 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.64■□□□□ 0.57
HOXC11O43248 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HOXC11O43248 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC11O43248 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC11O43248 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC11O43248 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXC11O43248 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXC11O43248 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC11O43248 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC11O43248 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC11O43248 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC11O43248 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC11O43248 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXC11O43248 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
HOXC11O43248 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC11O43248 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC11O43248 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HOXC11O43248 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC11O43248 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC11O43248 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.63■□□□□ 0.57
HOXC11O43248 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HOXC11O43248 BNIP3P18-201ENST00000593976 575 ntBASIC18.63■□□□□ 0.57
HOXC11O43248 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC11O43248 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HOXC11O43248 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.63■□□□□ 0.57
HOXC11O43248 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXC11O43248 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC11O43248 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC11O43248 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC11O43248 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC11O43248 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
HOXC11O43248 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC11O43248 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC11O43248 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC11O43248 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC11O43248 AKR1C7P-201ENST00000305623 895 ntBASIC18.62■□□□□ 0.57
HOXC11O43248 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.62■□□□□ 0.57
HOXC11O43248 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC11O43248 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.62■□□□□ 0.57
HOXC11O43248 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXC11O43248 AC009078.2-202ENST00000463353 338 ntBASIC18.62■□□□□ 0.57
HOXC11O43248 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms