Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD9O15198 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.67■□□□□ 0.26
SMAD9O15198 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.67■□□□□ 0.26
SMAD9O15198 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.67■□□□□ 0.26
SMAD9O15198 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SMAD9O15198 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SMAD9O15198 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.67■□□□□ 0.26
SMAD9O15198 NEK4P2-201ENST00000580004 1012 ntBASIC16.67■□□□□ 0.26
SMAD9O15198 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.67■□□□□ 0.26
SMAD9O15198 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.67■□□□□ 0.26
SMAD9O15198 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.67■□□□□ 0.26
SMAD9O15198 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.67■□□□□ 0.26
SMAD9O15198 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD9O15198 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SMAD9O15198 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SMAD9O15198 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD9O15198 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SMAD9O15198 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.67■□□□□ 0.26
SMAD9O15198 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.67■□□□□ 0.26
SMAD9O15198 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.67■□□□□ 0.26
SMAD9O15198 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMAD9O15198 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.67■□□□□ 0.26
SMAD9O15198 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD9O15198 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.66■□□□□ 0.26
SMAD9O15198 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
SMAD9O15198 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD9O15198 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.66■□□□□ 0.26
SMAD9O15198 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD9O15198 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD9O15198 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SMAD9O15198 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD9O15198 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD9O15198 TMPOP1-202ENST00000424642 1267 ntBASIC16.66■□□□□ 0.26
SMAD9O15198 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.66■□□□□ 0.26
SMAD9O15198 BX664615.1-201ENST00000443558 458 ntBASIC16.66■□□□□ 0.26
SMAD9O15198 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.66■□□□□ 0.26
SMAD9O15198 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.66■□□□□ 0.26
SMAD9O15198 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.66■□□□□ 0.26
SMAD9O15198 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.66■□□□□ 0.26
SMAD9O15198 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD9O15198 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SMAD9O15198 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
SMAD9O15198 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD9O15198 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD9O15198 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.66■□□□□ 0.26
SMAD9O15198 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMAD9O15198 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.66■□□□□ 0.26
SMAD9O15198 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.65■□□□□ 0.26
SMAD9O15198 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.65■□□□□ 0.26
SMAD9O15198 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SMAD9O15198 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SMAD9O15198 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SMAD9O15198 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.65■□□□□ 0.26
SMAD9O15198 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 OR6D1P-202ENST00000641007 5290 ntBASIC16.65■□□□□ 0.26
SMAD9O15198 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.65■□□□□ 0.26
SMAD9O15198 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.65■□□□□ 0.26
SMAD9O15198 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 COX11P1-201ENST00000489116 835 ntBASIC16.65■□□□□ 0.26
SMAD9O15198 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 AC006011.2-201ENST00000621313 1158 ntBASIC16.65■□□□□ 0.26
SMAD9O15198 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 AC034236.2-201ENST00000606662 1610 ntBASIC16.65■□□□□ 0.26
SMAD9O15198 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.65■□□□□ 0.26
SMAD9O15198 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.65■□□□□ 0.26
SMAD9O15198 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMAD9O15198 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SMAD9O15198 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SMAD9O15198 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SMAD9O15198 AL031598.1-201ENST00000561511 1773 ntBASIC16.64■□□□□ 0.25
SMAD9O15198 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD9O15198 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD9O15198 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.64■□□□□ 0.25
SMAD9O15198 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD9O15198 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD9O15198 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD9O15198 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms