Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPTBN2O15020 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.4■□□□□ 0.38
SPTBN2O15020 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPTBN2O15020 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SPTBN2O15020 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPTBN2O15020 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SPTBN2O15020 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SPTBN2O15020 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.39■□□□□ 0.38
SPTBN2O15020 AL512353.2-201ENST00000448759 1962 ntBASIC17.39■□□□□ 0.38
SPTBN2O15020 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SPTBN2O15020 OR8S1-201ENST00000310194 1080 ntBASIC17.39■□□□□ 0.38
SPTBN2O15020 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.39■□□□□ 0.38
SPTBN2O15020 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPTBN2O15020 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.39■□□□□ 0.37
SPTBN2O15020 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPTBN2O15020 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPTBN2O15020 GPR89P-201ENST00000407924 1495 ntBASIC17.39■□□□□ 0.37
SPTBN2O15020 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.39■□□□□ 0.37
SPTBN2O15020 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPTBN2O15020 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPTBN2O15020 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPTBN2O15020 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPTBN2O15020 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPTBN2O15020 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPTBN2O15020 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPTBN2O15020 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.39■□□□□ 0.37
SPTBN2O15020 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.39■□□□□ 0.37
SPTBN2O15020 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.39■□□□□ 0.37
SPTBN2O15020 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.39■□□□□ 0.37
SPTBN2O15020 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.39■□□□□ 0.37
SPTBN2O15020 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.39■□□□□ 0.37
SPTBN2O15020 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.39■□□□□ 0.37
SPTBN2O15020 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPTBN2O15020 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SPTBN2O15020 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.38■□□□□ 0.37
SPTBN2O15020 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.38■□□□□ 0.37
SPTBN2O15020 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SPTBN2O15020 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPTBN2O15020 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPTBN2O15020 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SPTBN2O15020 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SPTBN2O15020 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.38■□□□□ 0.37
SPTBN2O15020 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.38■□□□□ 0.37
SPTBN2O15020 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.38■□□□□ 0.37
SPTBN2O15020 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.38■□□□□ 0.37
SPTBN2O15020 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPTBN2O15020 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SPTBN2O15020 RCC2P3-201ENST00000418112 1537 ntBASIC17.38■□□□□ 0.37
SPTBN2O15020 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.38■□□□□ 0.37
SPTBN2O15020 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.38■□□□□ 0.37
SPTBN2O15020 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.38■□□□□ 0.37
SPTBN2O15020 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.38■□□□□ 0.37
SPTBN2O15020 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPTBN2O15020 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.38■□□□□ 0.37
SPTBN2O15020 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPTBN2O15020 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SPTBN2O15020 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.38■□□□□ 0.37
SPTBN2O15020 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SPTBN2O15020 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SPTBN2O15020 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SPTBN2O15020 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPTBN2O15020 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPTBN2O15020 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SPTBN2O15020 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.37■□□□□ 0.37
SPTBN2O15020 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPTBN2O15020 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.37■□□□□ 0.37
SPTBN2O15020 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.37■□□□□ 0.37
SPTBN2O15020 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.37■□□□□ 0.37
SPTBN2O15020 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPTBN2O15020 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPTBN2O15020 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPTBN2O15020 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.37■□□□□ 0.37
SPTBN2O15020 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPTBN2O15020 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SPTBN2O15020 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPTBN2O15020 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.37■□□□□ 0.37
SPTBN2O15020 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SPTBN2O15020 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPTBN2O15020 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPTBN2O15020 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPTBN2O15020 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPTBN2O15020 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPTBN2O15020 AC055876.3-201ENST00000431496 288 ntBASIC17.37■□□□□ 0.37
SPTBN2O15020 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SPTBN2O15020 AL606495.2-201ENST00000605867 535 ntBASIC17.37■□□□□ 0.37
SPTBN2O15020 AC138649.4-201ENST00000612222 287 ntBASIC17.37■□□□□ 0.37
SPTBN2O15020 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.37■□□□□ 0.37
SPTBN2O15020 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SPTBN2O15020 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPTBN2O15020 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPTBN2O15020 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.36■□□□□ 0.37
SPTBN2O15020 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPTBN2O15020 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.36■□□□□ 0.37
SPTBN2O15020 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.36■□□□□ 0.37
SPTBN2O15020 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPTBN2O15020 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.36■□□□□ 0.37
SPTBN2O15020 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SPTBN2O15020 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPTBN2O15020 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SPTBN2O15020 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms