Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX39AO00148 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DDX39AO00148 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DDX39AO00148 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
DDX39AO00148 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX39AO00148 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.62■□□□□ 0.89
DDX39AO00148 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX39AO00148 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX39AO00148 TNXA-203ENST00000507684 2038 ntBASIC20.61■□□□□ 0.89
DDX39AO00148 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX39AO00148 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX39AO00148 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.61■□□□□ 0.89
DDX39AO00148 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDX39AO00148 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDX39AO00148 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDX39AO00148 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX39AO00148 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX39AO00148 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.61■□□□□ 0.89
DDX39AO00148 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDX39AO00148 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.61■□□□□ 0.89
DDX39AO00148 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.61■□□□□ 0.89
DDX39AO00148 NPAP1P7-201ENST00000613027 823 ntBASIC20.61■□□□□ 0.89
DDX39AO00148 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.61■□□□□ 0.89
DDX39AO00148 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX39AO00148 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.61■□□□□ 0.89
DDX39AO00148 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX39AO00148 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDX39AO00148 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX39AO00148 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX39AO00148 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.6■□□□□ 0.89
DDX39AO00148 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX39AO00148 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
DDX39AO00148 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.6■□□□□ 0.89
DDX39AO00148 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX39AO00148 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX39AO00148 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX39AO00148 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX39AO00148 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX39AO00148 IGHGP-201ENST00000390555 1178 ntBASIC20.6■□□□□ 0.89
DDX39AO00148 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.6■□□□□ 0.89
DDX39AO00148 AP002383.4-201ENST00000442518 975 ntBASIC20.6■□□□□ 0.89
DDX39AO00148 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.6■□□□□ 0.89
DDX39AO00148 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
DDX39AO00148 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.6■□□□□ 0.89
DDX39AO00148 AL390719.2-201ENST00000606993 987 ntBASIC20.6■□□□□ 0.89
DDX39AO00148 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.6■□□□□ 0.89
DDX39AO00148 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.6■□□□□ 0.89
DDX39AO00148 AC004408.2-201ENST00000623613 2777 ntBASIC20.6■□□□□ 0.89
DDX39AO00148 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX39AO00148 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX39AO00148 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX39AO00148 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX39AO00148 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.6■□□□□ 0.89
DDX39AO00148 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
DDX39AO00148 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.59■□□□□ 0.89
DDX39AO00148 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX39AO00148 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX39AO00148 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDX39AO00148 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
DDX39AO00148 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.59■□□□□ 0.89
DDX39AO00148 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX39AO00148 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX39AO00148 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDX39AO00148 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
DDX39AO00148 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX39AO00148 ATP5G2P1-201ENST00000433580 426 ntBASIC20.59■□□□□ 0.89
DDX39AO00148 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.59■□□□□ 0.89
DDX39AO00148 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.59■□□□□ 0.89
DDX39AO00148 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDX39AO00148 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
DDX39AO00148 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
DDX39AO00148 AP002414.4-201ENST00000589764 1148 ntBASIC20.59■□□□□ 0.89
DDX39AO00148 GPR32P1-201ENST00000601788 811 ntBASIC20.59■□□□□ 0.89
DDX39AO00148 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX39AO00148 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.59■□□□□ 0.89
DDX39AO00148 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDX39AO00148 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.59■□□□□ 0.89
DDX39AO00148 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX39AO00148 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDX39AO00148 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
DDX39AO00148 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DDX39AO00148 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.58■□□□□ 0.89
DDX39AO00148 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX39AO00148 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
DDX39AO00148 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DDX39AO00148 AL024508.2-201ENST00000607749 1894 ntBASIC20.58■□□□□ 0.89
DDX39AO00148 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX39AO00148 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
DDX39AO00148 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX39AO00148 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX39AO00148 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX39AO00148 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX39AO00148 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX39AO00148 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX39AO00148 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX39AO00148 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX39AO00148 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.58■□□□□ 0.89
DDX39AO00148 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.58■□□□□ 0.89
DDX39AO00148 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DDX39AO00148 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms