Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.48■□□□□ 0.23
COL6A6A6NMZ7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.48■□□□□ 0.23
COL6A6A6NMZ7 AC092865.6-201ENST00000642101 219 ntBASIC16.48■□□□□ 0.23
COL6A6A6NMZ7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL6A6A6NMZ7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
COL6A6A6NMZ7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
COL6A6A6NMZ7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 AC005498.2-205ENST00000593218 784 ntBASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 AF228730.6-201ENST00000641497 218 ntBASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 AC084121.3-201ENST00000641716 218 ntBASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 AC105233.6-201ENST00000642093 218 ntBASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 AP002414.3-201ENST00000589352 1468 ntBASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 AC005225.4-201ENST00000557330 545 ntBASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 AC018845.2-201ENST00000568326 409 ntBASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A6A6NMZ7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 AC011467.2-201ENST00000598425 242 ntBASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A6A6NMZ7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.46■□□□□ 0.22
COL6A6A6NMZ7 AC012676.1-201ENST00000574705 1949 ntBASIC16.46■□□□□ 0.22
COL6A6A6NMZ7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL6A6A6NMZ7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL6A6A6NMZ7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
COL6A6A6NMZ7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
COL6A6A6NMZ7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL6A6A6NMZ7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL6A6A6NMZ7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.45■□□□□ 0.22
COL6A6A6NMZ7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL6A6A6NMZ7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL6A6A6NMZ7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.45■□□□□ 0.22
COL6A6A6NMZ7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.45■□□□□ 0.22
COL6A6A6NMZ7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.45■□□□□ 0.22
COL6A6A6NMZ7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL6A6A6NMZ7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.45■□□□□ 0.22
COL6A6A6NMZ7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.45■□□□□ 0.22
COL6A6A6NMZ7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.45■□□□□ 0.22
COL6A6A6NMZ7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.45■□□□□ 0.22
COL6A6A6NMZ7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms