Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.16■□□□□ 0.98
PALM3A6NDB9 AL121672.3-201ENST00000608644 468 ntBASIC21.16■□□□□ 0.98
PALM3A6NDB9 AC069148.1-201ENST00000608741 768 ntBASIC21.16■□□□□ 0.98
PALM3A6NDB9 AC004263.2-201ENST00000617183 678 ntBASIC21.16■□□□□ 0.98
PALM3A6NDB9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PALM3A6NDB9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.16■□□□□ 0.98
PALM3A6NDB9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PALM3A6NDB9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PALM3A6NDB9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PALM3A6NDB9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.16■□□□□ 0.98
PALM3A6NDB9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.16■□□□□ 0.98
PALM3A6NDB9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PALM3A6NDB9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PALM3A6NDB9 AC120498.9-201ENST00000339021 3867 ntBASIC21.15■□□□□ 0.98
PALM3A6NDB9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PALM3A6NDB9 AL353692.3-201ENST00000407031 1396 ntBASIC21.15■□□□□ 0.98
PALM3A6NDB9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.15■□□□□ 0.98
PALM3A6NDB9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.15■□□□□ 0.98
PALM3A6NDB9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PALM3A6NDB9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PALM3A6NDB9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.15■□□□□ 0.98
PALM3A6NDB9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PALM3A6NDB9 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PALM3A6NDB9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.15■□□□□ 0.98
PALM3A6NDB9 BX276092.5-203ENST00000456199 560 ntBASIC21.15■□□□□ 0.98
PALM3A6NDB9 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.15■□□□□ 0.98
PALM3A6NDB9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.15■□□□□ 0.98
PALM3A6NDB9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.15■□□□□ 0.98
PALM3A6NDB9 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.15■□□□□ 0.98
PALM3A6NDB9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.15■□□□□ 0.98
PALM3A6NDB9 NPAP1P7-201ENST00000613027 823 ntBASIC21.15■□□□□ 0.98
PALM3A6NDB9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.15■□□□□ 0.98
PALM3A6NDB9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PALM3A6NDB9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
PALM3A6NDB9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PALM3A6NDB9 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
PALM3A6NDB9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PALM3A6NDB9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PALM3A6NDB9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PALM3A6NDB9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.15■□□□□ 0.98
PALM3A6NDB9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PALM3A6NDB9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PALM3A6NDB9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
PALM3A6NDB9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PALM3A6NDB9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PALM3A6NDB9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PALM3A6NDB9 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.14■□□□□ 0.97
PALM3A6NDB9 AP002383.4-201ENST00000442518 975 ntBASIC21.14■□□□□ 0.97
PALM3A6NDB9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.14■□□□□ 0.97
PALM3A6NDB9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.14■□□□□ 0.97
PALM3A6NDB9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.14■□□□□ 0.97
PALM3A6NDB9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PALM3A6NDB9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PALM3A6NDB9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PALM3A6NDB9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PALM3A6NDB9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
PALM3A6NDB9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.14■□□□□ 0.97
PALM3A6NDB9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.14■□□□□ 0.97
PALM3A6NDB9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PALM3A6NDB9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
PALM3A6NDB9 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PALM3A6NDB9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.14■□□□□ 0.97
PALM3A6NDB9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PALM3A6NDB9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
PALM3A6NDB9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PALM3A6NDB9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PALM3A6NDB9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
PALM3A6NDB9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PALM3A6NDB9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PALM3A6NDB9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PALM3A6NDB9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PALM3A6NDB9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PALM3A6NDB9 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PALM3A6NDB9 ATP5G2P1-201ENST00000433580 426 ntBASIC21.13■□□□□ 0.97
PALM3A6NDB9 TSSC2-201ENST00000450217 709 ntBASIC21.13■□□□□ 0.97
PALM3A6NDB9 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.13■□□□□ 0.97
PALM3A6NDB9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.13■□□□□ 0.97
PALM3A6NDB9 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.13■□□□□ 0.97
PALM3A6NDB9 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.13■□□□□ 0.97
PALM3A6NDB9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PALM3A6NDB9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PALM3A6NDB9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PALM3A6NDB9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PALM3A6NDB9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PALM3A6NDB9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PALM3A6NDB9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.13■□□□□ 0.97
PALM3A6NDB9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.13■□□□□ 0.97
PALM3A6NDB9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PALM3A6NDB9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PALM3A6NDB9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PALM3A6NDB9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.12■□□□□ 0.97
PALM3A6NDB9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
PALM3A6NDB9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PALM3A6NDB9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PALM3A6NDB9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
PALM3A6NDB9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PALM3A6NDB9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PALM3A6NDB9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PALM3A6NDB9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PALM3A6NDB9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms