Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 MIR4674-201ENST00000582457 87 ntBASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 MIR3180-5-201ENST00000583743 153 ntBASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 AC012317.2-201ENST00000623305 2251 ntBASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 AL163051.1-201ENST00000569214 1512 ntBASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 AL135905.2-201ENST00000584934 1404 ntBASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 AC036111.1-201ENST00000533973 1582 ntBASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 CA15P1-201ENST00000481698 905 ntBASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.48■□□□□ 0.55
TCRBV9S1A1TA0A576 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 AC009102.3-201ENST00000623118 1491 ntBASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 NUDT16P1-203ENST00000513809 620 ntBASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV9S1A1TA0A576 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
TCRBV9S1A1TA0A576 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.46■□□□□ 0.55
TCRBV9S1A1TA0A576 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms