Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 HARS-201ENST00000307633 1780 ntTSL 2 BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 YBX1P10-201ENST00000444752 975 ntBASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 CYP2T3P-201ENST00000601990 817 ntBASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 AC010536.3-201ENST00000620306 533 ntBASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC12.13□□□□□ -0.47
TRAV13-2A0A0B4J235 NXN-202ENST00000537628 1340 ntTSL 3 BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 AL499627.1-201ENST00000569373 2188 ntBASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 PARP1-202ENST00000366792 553 ntTSL 3 BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 AC106739.1-201ENST00000617035 715 ntBASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 LTF-203ENST00000426532 2494 ntTSL 2 BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 NF2-208ENST00000403435 2568 ntTSL 5 BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV13-2A0A0B4J235 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms