Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 AC112777.1-201ENST00000540175 1423 ntBASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 AC009102.3-201ENST00000623118 1491 ntBASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 SCARNA2-201ENST00000458748 420 ntBASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 TP73-AS1-210ENST00000637775 1455 ntBASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC187A0A096LP49 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC187A0A096LP49 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC187A0A096LP49 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC187A0A096LP49 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC187A0A096LP49 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC187A0A096LP49 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC187A0A096LP49 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC187A0A096LP49 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CCDC187A0A096LP49 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CCDC187A0A096LP49 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC187A0A096LP49 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC187A0A096LP49 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 AC243591.1-201ENST00000452967 1364 ntBASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 AC009533.2-201ENST00000543664 586 ntBASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 AC139887.3-201ENST00000568585 713 ntBASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 AC005336.2-201ENST00000593183 939 ntBASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC187A0A096LP49 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms