Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SCN10AQ9Y5Y9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SCN10AQ9Y5Y9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.08■□□□□ 0.8
SCN10AQ9Y5Y9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SCN10AQ9Y5Y9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SCN10AQ9Y5Y9 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
SCN10AQ9Y5Y9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.08■□□□□ 0.8
SCN10AQ9Y5Y9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.08■□□□□ 0.8
SCN10AQ9Y5Y9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.08■□□□□ 0.8
SCN10AQ9Y5Y9 AC021087.4-201ENST00000563761 564 ntBASIC20.08■□□□□ 0.8
SCN10AQ9Y5Y9 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.08■□□□□ 0.8
SCN10AQ9Y5Y9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SCN10AQ9Y5Y9 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
SCN10AQ9Y5Y9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SCN10AQ9Y5Y9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCN10AQ9Y5Y9 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.07■□□□□ 0.8
SCN10AQ9Y5Y9 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.07■□□□□ 0.8
SCN10AQ9Y5Y9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCN10AQ9Y5Y9 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCN10AQ9Y5Y9 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.07■□□□□ 0.8
SCN10AQ9Y5Y9 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
SCN10AQ9Y5Y9 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCN10AQ9Y5Y9 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.07■□□□□ 0.8
SCN10AQ9Y5Y9 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SCN10AQ9Y5Y9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SCN10AQ9Y5Y9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCN10AQ9Y5Y9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SCN10AQ9Y5Y9 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SCN10AQ9Y5Y9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SCN10AQ9Y5Y9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.07■□□□□ 0.8
SCN10AQ9Y5Y9 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN10AQ9Y5Y9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.06■□□□□ 0.8
SCN10AQ9Y5Y9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN10AQ9Y5Y9 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN10AQ9Y5Y9 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SCN10AQ9Y5Y9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SCN10AQ9Y5Y9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.06■□□□□ 0.8
SCN10AQ9Y5Y9 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.06■□□□□ 0.8
SCN10AQ9Y5Y9 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.06■□□□□ 0.8
SCN10AQ9Y5Y9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN10AQ9Y5Y9 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SCN10AQ9Y5Y9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
SCN10AQ9Y5Y9 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.06■□□□□ 0.8
SCN10AQ9Y5Y9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
SCN10AQ9Y5Y9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN10AQ9Y5Y9 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SCN10AQ9Y5Y9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.06■□□□□ 0.8
SCN10AQ9Y5Y9 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.06■□□□□ 0.8
SCN10AQ9Y5Y9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.05■□□□□ 0.8
SCN10AQ9Y5Y9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCN10AQ9Y5Y9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCN10AQ9Y5Y9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SCN10AQ9Y5Y9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.05■□□□□ 0.8
SCN10AQ9Y5Y9 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SCN10AQ9Y5Y9 KRT18P65-201ENST00000439811 1286 ntBASIC20.05■□□□□ 0.8
SCN10AQ9Y5Y9 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SCN10AQ9Y5Y9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.05■□□□□ 0.8
SCN10AQ9Y5Y9 AL139288.1-201ENST00000623748 933 ntBASIC20.05■□□□□ 0.8
SCN10AQ9Y5Y9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCN10AQ9Y5Y9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCN10AQ9Y5Y9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SCN10AQ9Y5Y9 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCN10AQ9Y5Y9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 AC012640.2-201ENST00000561606 901 ntBASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 FAM215A-202ENST00000632077 792 ntBASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 AC005332.7-201ENST00000614046 2005 ntBASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 AC093909.1-201ENST00000504731 1122 ntBASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 AC092865.5-201ENST00000545435 363 ntBASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 TERC-201ENST00000602385 541 ntBASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN10AQ9Y5Y9 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN10AQ9Y5Y9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.03■□□□□ 0.8
SCN10AQ9Y5Y9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN10AQ9Y5Y9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.03■□□□□ 0.8
SCN10AQ9Y5Y9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.03■□□□□ 0.8
SCN10AQ9Y5Y9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.03■□□□□ 0.8
SCN10AQ9Y5Y9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN10AQ9Y5Y9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.03■□□□□ 0.8
SCN10AQ9Y5Y9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.03■□□□□ 0.8
SCN10AQ9Y5Y9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms