Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 KRT18P48-201ENST00000434763 852 ntBASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.63■□□□□ 0.73
SNX9Q9Y5X1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 AP003733.1-201ENST00000491725 852 ntBASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 RNF126P1-202ENST00000569893 925 ntBASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 AC011498.5-201ENST00000592027 486 ntBASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SNX9Q9Y5X1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SNX9Q9Y5X1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNX9Q9Y5X1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.61■□□□□ 0.73
SNX9Q9Y5X1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.61■□□□□ 0.73
SNX9Q9Y5X1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX9Q9Y5X1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNX9Q9Y5X1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.61■□□□□ 0.73
SNX9Q9Y5X1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNX9Q9Y5X1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SNX9Q9Y5X1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX9Q9Y5X1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX9Q9Y5X1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SNX9Q9Y5X1 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.61■□□□□ 0.73
SNX9Q9Y5X1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.61■□□□□ 0.73
SNX9Q9Y5X1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNX9Q9Y5X1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX9Q9Y5X1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SNX9Q9Y5X1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SNX9Q9Y5X1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.61■□□□□ 0.73
SNX9Q9Y5X1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms