Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHB11Q9Y5F2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 AC090164.3-201ENST00000610780 2143 ntBASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHB11Q9Y5F2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 KRT8P7-201ENST00000533003 1432 ntBASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB11Q9Y5F2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 AC083849.1-201ENST00000615227 514 ntBASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms