Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTCBQ9Y3I0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTCBQ9Y3I0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTCBQ9Y3I0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC23.11■■□□□ 1.29
RTCBQ9Y3I0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC23.11■■□□□ 1.29
RTCBQ9Y3I0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTCBQ9Y3I0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC23.11■■□□□ 1.29
RTCBQ9Y3I0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC23.11■■□□□ 1.29
RTCBQ9Y3I0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTCBQ9Y3I0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTCBQ9Y3I0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTCBQ9Y3I0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RTCBQ9Y3I0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RTCBQ9Y3I0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTCBQ9Y3I0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTCBQ9Y3I0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTCBQ9Y3I0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC23.1■■□□□ 1.29
RTCBQ9Y3I0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC23.1■■□□□ 1.29
RTCBQ9Y3I0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTCBQ9Y3I0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.1■■□□□ 1.29
RTCBQ9Y3I0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTCBQ9Y3I0 AC099343.3-201ENST00000605834 2503 ntBASIC23.1■■□□□ 1.29
RTCBQ9Y3I0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
RTCBQ9Y3I0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTCBQ9Y3I0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RTCBQ9Y3I0 PMS2P2-201ENST00000425039 1128 ntBASIC23.1■■□□□ 1.29
RTCBQ9Y3I0 AP001160.2-201ENST00000596071 487 ntBASIC23.1■■□□□ 1.29
RTCBQ9Y3I0 AC025062.2-201ENST00000605477 670 ntBASIC23.1■■□□□ 1.29
RTCBQ9Y3I0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC23.1■■□□□ 1.29
RTCBQ9Y3I0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTCBQ9Y3I0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTCBQ9Y3I0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
RTCBQ9Y3I0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.1■■□□□ 1.29
RTCBQ9Y3I0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 YBX2P1-201ENST00000394192 760 ntBASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 AL355385.1-201ENST00000606123 409 ntBASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC23.09■■□□□ 1.29
RTCBQ9Y3I0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 INIP-202ENST00000374236 874 ntTSL 2 BASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 HNRNPA1P28-201ENST00000424481 961 ntBASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 AC112482.1-201ENST00000492080 688 ntBASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 AC040169.1-201ENST00000565382 521 ntBASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 AC008735.5-201ENST00000623544 497 ntBASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 AL024508.2-201ENST00000607749 1894 ntBASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
RTCBQ9Y3I0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
RTCBQ9Y3I0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
RTCBQ9Y3I0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC23.08■■□□□ 1.28
RTCBQ9Y3I0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RTCBQ9Y3I0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 RPS8P6-201ENST00000426177 609 ntBASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 MIR3687-2-201ENST00000577708 61 ntBASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms