Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 LINC01238-205ENST00000567549 1107 ntBASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 AL358472.4-201ENST00000633140 710 ntBASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.85■□□□□ 0.29
RPH3AQ9Y2J0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 KRT18P56-201ENST00000507275 550 ntBASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPH3AQ9Y2J0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RPH3AQ9Y2J0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RPH3AQ9Y2J0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RPH3AQ9Y2J0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
RPH3AQ9Y2J0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 HOMER2P1-201ENST00000455653 964 ntBASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 AL499627.1-201ENST00000569373 2188 ntBASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms