Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMC3Q9UQE7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SMC3Q9UQE7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.6■■□□□ 1.05
SMC3Q9UQE7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.6■■□□□ 1.05
SMC3Q9UQE7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.6■■□□□ 1.05
SMC3Q9UQE7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.6■■□□□ 1.05
SMC3Q9UQE7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SMC3Q9UQE7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.6■■□□□ 1.05
SMC3Q9UQE7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SMC3Q9UQE7 GMCL1P1-201ENST00000463439 1581 ntBASIC21.6■■□□□ 1.05
SMC3Q9UQE7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMC3Q9UQE7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMC3Q9UQE7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMC3Q9UQE7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.6■■□□□ 1.05
SMC3Q9UQE7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SMC3Q9UQE7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SMC3Q9UQE7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMC3Q9UQE7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.59■■□□□ 1.05
SMC3Q9UQE7 AC134043.2-201ENST00000624206 2238 ntBASIC21.59■■□□□ 1.05
SMC3Q9UQE7 AC099343.3-201ENST00000605834 2503 ntBASIC21.59■■□□□ 1.05
SMC3Q9UQE7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.59■■□□□ 1.05
SMC3Q9UQE7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SMC3Q9UQE7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
SMC3Q9UQE7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMC3Q9UQE7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.59■■□□□ 1.05
SMC3Q9UQE7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.59■■□□□ 1.05
SMC3Q9UQE7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.59■■□□□ 1.05
SMC3Q9UQE7 AC142381.4-202ENST00000563973 229 ntBASIC21.59■■□□□ 1.05
SMC3Q9UQE7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.59■■□□□ 1.05
SMC3Q9UQE7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMC3Q9UQE7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMC3Q9UQE7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SMC3Q9UQE7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SMC3Q9UQE7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.59■■□□□ 1.05
SMC3Q9UQE7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
SMC3Q9UQE7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
SMC3Q9UQE7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SMC3Q9UQE7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.58■■□□□ 1.05
SMC3Q9UQE7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SMC3Q9UQE7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMC3Q9UQE7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMC3Q9UQE7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.58■■□□□ 1.05
SMC3Q9UQE7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SMC3Q9UQE7 PRORSD1P-201ENST00000295112 541 ntBASIC21.58■■□□□ 1.05
SMC3Q9UQE7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SMC3Q9UQE7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMC3Q9UQE7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.58■■□□□ 1.05
SMC3Q9UQE7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.58■■□□□ 1.05
SMC3Q9UQE7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SMC3Q9UQE7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SMC3Q9UQE7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SMC3Q9UQE7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SMC3Q9UQE7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SMC3Q9UQE7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SMC3Q9UQE7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.58■■□□□ 1.04
SMC3Q9UQE7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SMC3Q9UQE7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
SMC3Q9UQE7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SMC3Q9UQE7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 RPS2P55-201ENST00000397318 883 ntBASIC21.57■■□□□ 1.04
SMC3Q9UQE7 SLC25A6P5-201ENST00000435663 894 ntBASIC21.57■■□□□ 1.04
SMC3Q9UQE7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 CA15P1-201ENST00000481698 905 ntBASIC21.57■■□□□ 1.04
SMC3Q9UQE7 AC107956.1-201ENST00000494359 873 ntBASIC21.57■■□□□ 1.04
SMC3Q9UQE7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 AL096828.2-201ENST00000567259 1965 ntBASIC21.57■■□□□ 1.04
SMC3Q9UQE7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.57■■□□□ 1.04
SMC3Q9UQE7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMC3Q9UQE7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SMC3Q9UQE7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMC3Q9UQE7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMC3Q9UQE7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.56■■□□□ 1.04
SMC3Q9UQE7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMC3Q9UQE7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMC3Q9UQE7 GNAS-203ENST00000306120 1878 ntBASIC21.56■■□□□ 1.04
SMC3Q9UQE7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SMC3Q9UQE7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms